RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 FAM90A12PA8MX19 464 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 FAM90A23PA8MXZ1 464 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 DSCR3O14972 297 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 ITGB6P18564 788 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 PTGER1P34995 402 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 CCT4P50991 539 aaKnown RBP5.58□□□□□ -1.52
LSM5-209ENST00000468872 MVDP53602 400 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 TDGQ13569 410 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 ALKBH1Q13686 389 aaKnown RBP5.58□□□□□ -1.52
LSM5-209ENST00000468872 GPR162Q16538 588 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 BAK1Q16611 211 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 GXYLT1Q4G148 440 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 CC2D1BQ5T0F9 858 aaKnown RBP5.58□□□□□ -1.52
LSM5-209ENST00000468872 FAAH2Q6GMR7 532 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 RANBP10Q6VN20 620 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 RTL10Q7L3V2 364 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 MDGA2Q7Z553 956 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 VPS52Q8N1B4 723 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 C8orf58Q8NAV2 365 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 ABHD14AQ9BUJ0 271 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 TRIM2Q9C040 744 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 MROH8Q9H579 483 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 MAP3K20Q9NYL2 800 aaKnown RBP5.58□□□□□ -1.52
LSM5-209ENST00000468872 PKP3Q9Y446 797 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 FNDC1Q4ZHG4 1894 aaPredicted RBP5.58□□□□□ -1.52
LSM5-209ENST00000468872 SPATA31A5Q5VU36 1347 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 SPATA31A7Q8IWB4 1347 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 SH2D7A6NKC9 451 aaPredicted RBP5.57□□□□□ -1.52
LSM5-209ENST00000468872 POC1B-GALNT4F8VUJ3 575 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 RRHO14718 337 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 METTL18O95568 372 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 ENO1P06733 434 aaKnown RBP5.57□□□□□ -1.52
LSM5-209ENST00000468872 PKMP14618 531 aaKnown RBP5.57□□□□□ -1.52
LSM5-209ENST00000468872 CAPN3P20807 821 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 ABCD3P28288 659 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 GGT5P36269 586 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 ADPRHP54922 357 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 CASP6P55212 293 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 TBL3Q12788 808 aaKnown RBP5.57□□□□□ -1.52
LSM5-209ENST00000468872 SEC23BQ15437 767 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 GPR68Q15743 365 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 NFIL3Q16649 462 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 SLC2A7Q6PXP3 512 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 RNF144BQ7Z419 303 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 TMEM200AQ86VY9 491 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 GALNT16Q8N428 558 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 C9orf106Q8NAJ2 232 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 C2CD4CQ8TF44 421 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 RFFLQ8WZ73 363 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 C5orf34Q96MH7 638 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 CLSTN3Q9BQT9 956 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 FUZQ9BT04 418 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 TRIM31Q9BZY9 425 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 ERCC6Q03468 1493 aa5.57□□□□□ -1.52
LSM5-209ENST00000468872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 SMIM35A0A1B0GVV1 85 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 C17orf100A8MU93 164 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 KRTAP29-1A8MX34 341 aaPredicted RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 MCIDASD6RGH6 385 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 CYP4B1P13584 511 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 TGM2P21980 687 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 PRKCHP24723 683 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 RPS6KA3P51812 740 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 ARHGAP8P85298 464 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 SEMA3AQ14563 771 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 PFKFB3Q16875 520 aaPredicted RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 GLE1Q53GS7 698 aaKnown RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 SH2D4BQ5SQS7 431 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 HYIQ5T013 277 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 UBAP2Q5T6F2 1119 aaKnown RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 ZNF474Q6S9Z5 364 aaPredicted RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 DHRS13Q6UX07 377 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 CLEC4GQ6UXB4 293 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 RHPN2Q8IUC4 686 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 BRSK2Q8IWQ3 736 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 FAM110DQ8TAY7 271 aaPredicted RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 DENND1AQ8TEH3 1009 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 HDAC2Q92769 488 aaKnown RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 ELP4Q96EB1 424 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 P2RY11Q96G91 374 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 APOPT1Q96IL0 206 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 ZNF48Q96MX3 618 aaPredicted RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 FCRL4Q96PJ5 515 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 ZNF347Q96SE7 839 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 PRSS22Q9GZN4 317 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 TXNRD2Q9NNW7 524 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 MLXIPLQ9NP71 852 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 PDGFCQ9NRA1 345 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 ARL8BQ9NVJ2 186 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.56□□□□□ -1.52
LSM5-209ENST00000468872 HDAC6Q9UBN7 1215 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 CNOT7Q9UIV1 285 aaKnown RBP5.56□□□□□ -1.52
LSM5-209ENST00000468872 SLC25A13Q9UJS0 675 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 SUFUQ9UMX1 484 aa5.56□□□□□ -1.52
LSM5-209ENST00000468872 ZNF521Q96K83 1311 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 KCNU1A8MYU2 1149 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 UBE2Q2LH0YL09 131 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 SYN3O14994 580 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 TULP3O75386 442 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms