RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 COG4Q9H9E3 785 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 MAN1C1Q9NR34 630 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 UBQLN1Q9UMX0 589 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 PCDHB12Q9Y5F1 795 aa16.14■□□□□ 0.17
TSPAN4-211ENST00000468468 M0QYT0 321 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 EEF2KO00418 725 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 HSPA4LO95757 839 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 ITGAXP20702 1163 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 SERPINB8P50452 374 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 FRMD7Q6ZUT3 714 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 GALNT15Q8N3T1 639 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 ZNF781Q8N8C0 355 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 OR6Y1Q8NGX8 325 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 KLK14Q9P0G3 267 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 ADAM28Q9UKQ2 775 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 DNAH12Q6ZR08 3092 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 XPO1O14980 1071 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 DAB1O75553 588 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 BTKQ06187 659 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 PAFAH1B3Q15102 231 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 LPCAT4Q643R3 524 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 FSTL4Q6MZW2 842 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 ALKAL1Q6UXT8 129 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 APPL2Q8NEU8 664 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 AGAP2Q99490 1192 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 CDH19Q9H159 772 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 CDY2AQ9Y6F7 541 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 CDY1Q9Y6F8 540 aa16.13■□□□□ 0.17
TSPAN4-211ENST00000468468 E9PBE3 544 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 PIRO00625 290 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 KLHL41O60662 606 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 GPR32O75388 356 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 COX4I1P13073 169 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 NOS2P35228 1153 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 MAGEA12P43365 314 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 ABCG1P45844 678 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 LIMK2P53671 638 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 MAP2K5Q13163 448 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 FSCBQ5H9T9 825 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 TCHHL1Q5QJ38 904 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 MORN1Q5T089 497 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 NAPRTQ6XQN6 538 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 ARHGAP22Q7Z5H3 698 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 PDSS2Q86YH6 399 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 HPS6Q86YV9 775 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 DNAAF3Q8N9W5 541 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 JADE3Q92613 823 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 GORASP1Q9BQQ3 440 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 CAB39LQ9H9S4 337 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 ADAMTS6Q9UKP5 1117 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 MAGED2Q9UNF1 606 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 POMPQ9Y244 141 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 ZBTB14O43829 449 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 F2P00734 622 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 NDUFV1P49821 464 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 POLE2P56282 527 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 IRF9Q00978 393 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 TBL3Q12788 808 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 HNRNPDQ14103 355 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 SLC9B1Q4ZJI4 515 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 SYPL2Q5VXT5 272 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 NOTUMQ6P988 496 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 EPGNQ6UW88 154 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 AGR3Q8TD06 166 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 NPY6RQ99463 290 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 BFARQ9NZS9 450 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 VANGL2Q9ULK5 521 aa16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 SF3B1O75533 1304 aaKnown RBP eCLIP16.12■□□□□ 0.17
TSPAN4-211ENST00000468468 A0A096LPK6 155 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 RRN3P2A6NIE6 340 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 G3V2L1 256 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 CLDN5O00501 218 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 RNASEH1O60930 286 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 CD4P01730 458 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 CYP2C9P11712 490 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 CYP2B6P20813 491 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 PTPN3P26045 913 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 SERPINB6P35237 376 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 BEX3Q00994 111 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 DPYSQ14117 519 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 DLG2Q15700 870 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 SFT2D3Q587I9 215 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 FBXW8Q8N3Y1 598 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 DNAJB3Q8WWF6 145 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 ISL2Q96A47 359 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 FAM192AQ9GZU8 254 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 GOLGA2P5Q9HBQ8 144 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 GDAP2Q9NXN4 497 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 ARHGAP26Q9UNA1 814 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 SMIM28A0A1B0GU29 152 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 DCLK1O15075 740 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 ZNF865P0CJ78 1059 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 SCNN1BP51168 640 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 KLF10Q13118 480 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 HSP90AA5PQ58FG0 334 aa16.11■□□□□ 0.17
TSPAN4-211ENST00000468468 MAPK15Q8TD08 544 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms