RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 C5AR1P21730 350 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 CD27P26842 260 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 RDXP35241 583 aaKnown RBP19.61■□□□□ 0.73
COL7A1-207ENST00000467985 GGCXP38435 758 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 IRAK1P51617 712 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 KRT83P78385 493 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 FMO1Q01740 532 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 C2CD6Q53TS8 623 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 BNIPLQ7Z465 357 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 SETD3Q86TU7 594 aaPredicted RBP19.61■□□□□ 0.73
COL7A1-207ENST00000467985 STK40Q8N2I9 435 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 OR2I1PQ8NGU4 316 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 CFAP57Q96MR6 1250 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 C2orf49Q9BVC5 232 aaPredicted RBP19.61■□□□□ 0.73
COL7A1-207ENST00000467985 MUC3BQ9H195 1237 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 ANLNQ9NQW6 1124 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 TPX2Q9ULW0 747 aaKnown RBP19.61■□□□□ 0.73
COL7A1-207ENST00000467985 OR51B4Q9Y5P0 310 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 PCNX2A6NKB5 2137 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 NYNRINQ9P2P1 1898 aaKnown RBP19.6■□□□□ 0.73
COL7A1-207ENST00000467985 MAP1BP46821 2468 aaKnown RBP19.6■□□□□ 0.73
COL7A1-207ENST00000467985 A0A1W2PP55 124 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 DRGXA6NNA5 263 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 IL1BP01584 269 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 RHOCP08134 193 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 ZNF883P0CG24 379 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 GOT1P17174 413 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 CHRNB2P17787 502 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 PSMD8P48556 350 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 TYRO3Q06418 890 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 C6orf118Q5T5N4 469 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 KIAA0895LQ68EN5 471 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 ZNF683Q8IZ20 524 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 OR2T34Q8NGX1 318 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 FRS2Q8WU20 508 aa19.6■□□□□ 0.73
COL7A1-207ENST00000467985 METTL5Q9NRN9 209 aaKnown RBP19.6■□□□□ 0.73
COL7A1-207ENST00000467985 IGLV3-10A0A075B6K4 115 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 I6L893 689 aaPredicted RBP19.59■□□□□ 0.73
COL7A1-207ENST00000467985 ALOX15BO15296 676 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 CNTN5O94779 1100 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 ENDOD1O94919 500 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 SDC4P31431 198 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 NSFP46459 744 aaKnown RBP19.59■□□□□ 0.73
COL7A1-207ENST00000467985 GRIA4P48058 902 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 GALCP54803 685 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 NCAPHQ15003 741 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 ACCSLQ4AC99 568 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 FAM46CQ5VWP2 391 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 OR8D1Q8WZ84 308 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 NEUROG2Q9H2A3 272 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 GAREM1Q9H706 876 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 TM9SF3Q9HD45 589 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 SERGEFQ9UGK8 458 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 HS3ST2Q9Y278 367 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 USP24Q9UPU5 2620 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 AKAP13Q12802 2813 aa19.59■□□□□ 0.73
COL7A1-207ENST00000467985 FAM170AA1A519 330 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 SYCE3A1L190 88 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 FAM47DPA6NHR8 397 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 E9PAM4 449 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 IGHV4-34P06331 123 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 CCDC172P0C7W6 258 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 UNGP13051 313 aaPredicted RBP19.58■□□□□ 0.72
COL7A1-207ENST00000467985 CSNK1EP49674 416 aaKnown RBP19.58■□□□□ 0.72
COL7A1-207ENST00000467985 CCR5P51681 352 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 SIM1P81133 766 aaPredicted RBP19.58■□□□□ 0.72
COL7A1-207ENST00000467985 DLG2Q15700 870 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 HLA-BQ31612 363 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 ARL13BQ3SXY8 428 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 ALFQ53S48 1182 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 TRNP1Q6NT89 227 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 NCEH1Q6PIU2 408 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 ZNF783Q6ZMS7 281 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 FAM131BQ86XD5 332 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 SH2D3CQ8N5H7 860 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 AADATQ8N5Z0 425 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 AOPEPQ8N6M6 819 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 OR52K2Q8NGK3 314 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 SLC30A5Q8TAD4 765 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 BPIFA3Q9BQP9 254 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 C11orf70Q9BRQ4 267 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 FARP1Q9Y4F1 1045 aaPredicted RBP19.58■□□□□ 0.72
COL7A1-207ENST00000467985 ASPMQ8IZT6 3477 aa19.58■□□□□ 0.72
COL7A1-207ENST00000467985 KNL1Q8NG31 2342 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 A0A1B0GVT2 93 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 SRGAP2O75044 1071 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 CALB1P05937 261 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 VAV1P15498 845 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 OR1E1P30953 314 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 PTPN9P43378 593 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 NUMBP49757 651 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 GSCP56915 257 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-207ENST00000467985 ATP11AP98196 1134 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 BNC1Q01954 994 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 FOXC1Q12948 553 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 CLEC16AQ2KHT3 1053 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 ZSCAN23Q3MJ62 389 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 STRADAQ7RTN6 431 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 APTXQ7Z2E3 356 aaKnown RBP19.57■□□□□ 0.72
COL7A1-207ENST00000467985 NAXDQ8IW45 347 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms