RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 KRT82Q9NSB4 513 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 RBAKQ9NYW8 714 aaPredicted RBP13.07□□□□□ -0.32
UBR4-210ENST00000466969 SPASTQ9UBP0 616 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 NPHP3-ACAD11A0A0J9YXS1 232 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 A0A1W2PQM1 296 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 ANXA6P08133 673 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 CD70P32970 193 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 RECQLP46063 649 aaPredicted RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 ZNF445P59923 1031 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 ZFP36L1Q07352 338 aaKnown RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 EFEMP1Q12805 493 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 FZD2Q14332 565 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 ZRSR1Q15695 479 aaKnown RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 ZRANB3Q5FWF4 1079 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 C16orf46Q6P387 395 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 DYMQ7RTS9 669 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 ABI3BPQ7Z7G0 1075 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 FAM217AQ8IXS0 508 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 KCTD17Q8N5Z5 321 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 SYT2Q8N9I0 419 aaPredicted RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 KDM1BQ8NB78 822 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 BTN2A2Q8WVV5 523 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 FAM131CQ96AQ9 280 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 TMA16Q96EY4 203 aaKnown RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
UBR4-210ENST00000466969 GULP1Q9UBP9 304 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 RABGEF1Q9UJ41 708 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 KCNMB2Q9Y691 235 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 UNC13CQ8NB66 2214 aa13.06□□□□□ -0.32
UBR4-210ENST00000466969 TACC2O95359 2948 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 SPTY2D1-AS1A0A0U1RR47 76 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 PRSS44E7EML9 344 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 RAD1O60671 282 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
UBR4-210ENST00000466969 C8BP07358 591 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 FAM163BP0C2L3 166 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 PLA2G4BP0C869 781 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 TCN2P20062 427 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 PDCP20941 246 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 PSMA5P28066 241 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 PSEN1P49768 467 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 GTF2BQ00403 316 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 SRSF11Q05519 484 aaKnown RBP13.05□□□□□ -0.32
UBR4-210ENST00000466969 TOB2Q14106 344 aaPredicted RBP13.05□□□□□ -0.32
UBR4-210ENST00000466969 ELAVL3Q14576 367 aaKnown RBP13.05□□□□□ -0.32
UBR4-210ENST00000466969 PHF19Q5T6S3 580 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 GCNT7Q6ZNI0 430 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 ZNF557Q8N988 423 aaPredicted RBP13.05□□□□□ -0.32
UBR4-210ENST00000466969 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 TAAR9Q96RI9 348 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 CYP4F12Q9HCS2 524 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 ODF2LQ9ULJ1 636 aa13.05□□□□□ -0.32
UBR4-210ENST00000466969 ZNF106Q9H2Y7 1883 aaKnown RBP13.05□□□□□ -0.32
UBR4-210ENST00000466969 A0A1W2PQU0 124 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 FAM13AO94988 1023 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 TNNC2P02585 160 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 ADKP55263 362 aaKnown RBP13.04□□□□□ -0.32
UBR4-210ENST00000466969 MAP3K7CLP57077 242 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 TNNC1P63316 161 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 SMTNL2Q2TAL5 461 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 FAM46CQ5VWP2 391 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 PAQR9Q6ZVX9 377 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 ZMIZ2Q8NF64 920 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 MRGPRX3Q96LB0 322 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 SMOQ99835 787 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 PARVGQ9HBI0 331 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 RRN3Q9NYV6 651 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
UBR4-210ENST00000466969 LMO7DNF2Z398 122 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 RFPL1O75677 317 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 SORBS2O94875 1100 aaKnown RBP13.03□□□□□ -0.32
UBR4-210ENST00000466969 LDHAP00338 332 aaKnown RBP13.03□□□□□ -0.32
UBR4-210ENST00000466969 SRPRAP08240 638 aaKnown RBP13.03□□□□□ -0.32
UBR4-210ENST00000466969 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 CCL4P13236 92 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 PTGER4P35408 488 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 CSKP41240 450 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 METAP1P53582 386 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 SLC12A3P55017 1021 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 RNASE9P60153 205 aaKnown RBP13.03□□□□□ -0.32
UBR4-210ENST00000466969 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 C1orf61Q13536 156 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 NADK2Q4G0N4 442 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 PRRT3Q5FWE3 981 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 AGBL4Q5VU57 503 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 RNF219Q5W0B1 726 aaPredicted RBP13.03□□□□□ -0.32
UBR4-210ENST00000466969 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 STARD8Q92502 1023 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 SAAL1Q96ER3 474 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 APOBEC3BQ9UH17 382 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms