RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 IGLV3-25P01717 112 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 KRT5P13647 590 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 PDGFRAP16234 1089 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 CKMT2P17540 419 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 VASPP50552 380 aaPredicted RBP16.76■□□□□ 0.27
BRD9-201ENST00000466684 CLDN6P56747 220 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 BNIP3Q12983 259 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 STAT4Q14765 748 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 RTP5Q14D33 572 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 FRS2Q8WU20 508 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 BAP1Q92560 729 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 ERCC4Q92889 916 aaPredicted RBP16.76■□□□□ 0.27
BRD9-201ENST00000466684 ARHGAP20Q9P2F6 1191 aa16.76■□□□□ 0.27
BRD9-201ENST00000466684 E5RJQ4 531 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 PLRG1O43660 514 aaKnown RBP16.75■□□□□ 0.27
BRD9-201ENST00000466684 RTN2O75298 545 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 VAV1P15498 845 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 MTA1Q13330 715 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 ACCSLQ4AC99 568 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 DENND1BQ6P3S1 775 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 FOXR2Q6PJQ5 311 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 TMEM110Q86TL2 294 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 TRIM69Q86WT6 500 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 SPATS2Q86XZ4 545 aaKnown RBP16.75■□□□□ 0.27
BRD9-201ENST00000466684 CACTIN-AS1Q8N1I8 211 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 KREMEN1Q96MU8 473 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 TIGD1Q96MW7 591 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 PRMT1Q99873 361 aaKnown RBP16.75■□□□□ 0.27
BRD9-201ENST00000466684 FAM204AQ9H8W3 233 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 SLC25A13Q9UJS0 675 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 CELSR3Q9NYQ7 3312 aa16.75■□□□□ 0.27
BRD9-201ENST00000466684 GCN1Q92616 2671 aaKnown RBP16.74■□□□□ 0.27
BRD9-201ENST00000466684 BICDL2A1A5D9 508 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 C1QTNF3-AMACRE9PGA6 284 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 TK2O00142 265 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 ALOX15BO15296 676 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 LETM1O95202 739 aaPredicted RBP16.74■□□□□ 0.27
BRD9-201ENST00000466684 GNA14O95837 355 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 ITPKBP27987 946 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 MAT2AP31153 395 aaKnown RBP16.74■□□□□ 0.27
BRD9-201ENST00000466684 CCR1P32246 355 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 CDK17Q00537 523 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 EIF4EBP2Q13542 120 aaPredicted RBP16.74■□□□□ 0.27
BRD9-201ENST00000466684 SETMARQ53H47 684 aaPredicted RBP16.74■□□□□ 0.27
BRD9-201ENST00000466684 TTI2Q6NXR4 508 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 KANSL1Q7Z3B3 1105 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 CIR1Q86X95 450 aaPredicted RBP16.74■□□□□ 0.27
BRD9-201ENST00000466684 ZNF606Q8WXB4 792 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 RNF34Q969K3 372 aa16.74■□□□□ 0.27
BRD9-201ENST00000466684 PRAMEF26H0Y7S4 382 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 TLX3O43711 291 aaPredicted RBP16.73■□□□□ 0.27
BRD9-201ENST00000466684 ATP9BO43861 1147 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
BRD9-201ENST00000466684 ZNF18P17022 549 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 ACP1P24666 158 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 NUMBP49757 651 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 C19orf57Q0VDD7 668 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 ISM2Q6H9L7 571 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 KLHL10Q6JEL2 608 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 CXorf57Q6NSI4 855 aaKnown RBP16.73■□□□□ 0.27
BRD9-201ENST00000466684 TRIM59Q8IWR1 403 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 SNIP1Q8TAD8 396 aaKnown RBP16.73■□□□□ 0.27
BRD9-201ENST00000466684 RFFLQ8WZ73 363 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 RPRD1AQ96P16 312 aaPredicted RBP16.73■□□□□ 0.27
BRD9-201ENST00000466684 INTS2Q9H0H0 1204 aaKnown RBP16.73■□□□□ 0.27
BRD9-201ENST00000466684 PRORYQ9H606 182 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 UBE2TQ9NPD8 197 aaPredicted RBP16.73■□□□□ 0.27
BRD9-201ENST00000466684 DDIT4Q9NX09 232 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 SARDHQ9UL12 918 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 PPM1HQ9ULR3 514 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 CLCA2Q9UQC9 943 aa16.73■□□□□ 0.27
BRD9-201ENST00000466684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.73■□□□□ 0.27
BRD9-201ENST00000466684 ASXL3Q9C0F0 2248 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.72■□□□□ 0.27
BRD9-201ENST00000466684 MCF2LO15068 1137 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 THAP12O43422 761 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 RNGTTO60942 597 aaKnown RBP16.72■□□□□ 0.27
BRD9-201ENST00000466684 AFPP02771 609 aaKnown RBP16.72■□□□□ 0.27
BRD9-201ENST00000466684 GLI1P08151 1106 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 GLDCP23378 1020 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 GNA15P30679 374 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 METAP1P53582 386 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 PITX1P78337 314 aaPredicted RBP16.72■□□□□ 0.27
BRD9-201ENST00000466684 E2F1Q01094 437 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 CNTN1Q12860 1018 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 ZNF177Q13360 481 aaPredicted RBP16.72■□□□□ 0.27
BRD9-201ENST00000466684 PDCLQ13371 301 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 HS1BP3Q53T59 392 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 AGBL4Q5VU57 503 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 FBXL22Q6P050 247 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 ENOSF1Q7L5Y1 443 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 NELFBQ8WX92 580 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 FGF11Q92914 225 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 KLHDC7BQ96G42 594 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 FEM1AQ9BSK4 669 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 PREBQ9HCU5 417 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 MAN1B1Q9UKM7 699 aa16.72■□□□□ 0.27
BRD9-201ENST00000466684 SYNJ2BP-COX16A0A087WUM0 186 aa16.71■□□□□ 0.27
BRD9-201ENST00000466684 ATXN7O15265 892 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms