RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 VIMP08670 466 aaKnown RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 CORO1AP31146 461 aaKnown RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 HOXA9P31269 272 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 SLC6A4P31645 630 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 CHKAP35790 457 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 VCPP55072 806 aaKnown RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 COG7P83436 770 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 HYAL1Q12794 435 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 CBX2Q14781 532 aaPredicted RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 NOMO1Q15155 1222 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 LONRF1Q17RB8 773 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 TCEAL5Q5H9L2 206 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 UBAP2Q5T6F2 1119 aaKnown RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 FBXL22Q6P050 247 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 DRICH1Q6PGQ1 229 aaPredicted RBP19.1■□□□□ 0.65
CAPN3-209ENST00000466222 ATP6V0D2Q8N8Y2 350 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 ING5Q8WYH8 240 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 PRDM12Q9H4Q4 367 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 CCL26Q9Y258 94 aa19.1■□□□□ 0.65
CAPN3-209ENST00000466222 CHUKO15111 745 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 CNTN5O94779 1100 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 HNRNPA1P09651 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
CAPN3-209ENST00000466222 RBP3P10745 1247 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 CDC25CP30307 473 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 NUMBP49757 651 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 EPHA5P54756 1037 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 FAM133BQ5BKY9 247 aaKnown RBP19.09■□□□□ 0.65
CAPN3-209ENST00000466222 UNC45BQ8IWX7 931 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 DYDC1Q8WWB3 177 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 SGSM3Q96HU1 749 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 CELF6Q96J87 481 aaKnown RBP19.09■□□□□ 0.65
CAPN3-209ENST00000466222 ZSWIM3Q96MP5 696 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 ZDHHC7Q9NXF8 308 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 NINJ2Q9NZG7 142 aa19.09■□□□□ 0.65
CAPN3-209ENST00000466222 AGO1Q9UL18 857 aaKnown RBP19.09■□□□□ 0.65
CAPN3-209ENST00000466222 COLQQ9Y215 455 aaPredicted RBP19.09■□□□□ 0.65
CAPN3-209ENST00000466222 GREM1O60565 184 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 XYLBO75191 536 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 CDH16O75309 829 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 C1RP00736 705 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 TGM2P21980 687 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 HCAR3P49019 387 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 HARS2P49590 506 aaKnown RBP19.08■□□□□ 0.65
CAPN3-209ENST00000466222 VPS41P49754 854 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 PPARDQ03181 441 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 ALFQ53S48 1182 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 GPR158Q5T848 1215 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 NUGGCQ68CJ6 796 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 TFAP2DQ7Z6R9 452 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 CFAP52Q8N1V2 620 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 RIN3Q8TB24 985 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 ITFG1Q8TB96 612 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 NKD2Q969F2 451 aaPredicted RBP19.08■□□□□ 0.65
CAPN3-209ENST00000466222 C1orf74Q96LT6 269 aa19.08■□□□□ 0.65
CAPN3-209ENST00000466222 TTYH1Q9H313 450 aaPredicted RBP19.08■□□□□ 0.65
CAPN3-209ENST00000466222 MYO16Q9Y6X6 1858 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 KPNA1P52294 538 aaPredicted RBP19.08■□□□□ 0.64
CAPN3-209ENST00000466222 PRSS36Q5K4E3 855 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 IZUMO3Q5VZ72 239 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 GSTA5Q7RTV2 222 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 CHSY1Q86X52 802 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 FAM71DQ8N9W8 422 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 TTC13Q8NBP0 860 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 ST13P5Q8NFI4 369 aaPredicted RBP19.08■□□□□ 0.64
CAPN3-209ENST00000466222 MAGEC3Q8TD91 643 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 SMG7Q92540 1137 aaKnown RBP19.08■□□□□ 0.64
CAPN3-209ENST00000466222 GCNAQ96QF7 691 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 LGMNQ99538 433 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 PIDD1Q9HB75 910 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 SLC12A4Q9UP95 1085 aa19.08■□□□□ 0.64
CAPN3-209ENST00000466222 GREB1Q4ZG55 1949 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.07■□□□□ 0.64
CAPN3-209ENST00000466222 TMEM120BA0PK00 339 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 VGLL3A8MV65 326 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 H7C0C1 242 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 MCF2LO15068 1137 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 ACSL4O60488 711 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 IFNB1P01574 187 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 ATP5OP48047 213 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 SGSHP51688 502 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 NR1H3Q13133 447 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 GRIN2CQ14957 1233 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 HIBCHQ6NVY1 386 aaPredicted RBP19.07■□□□□ 0.64
CAPN3-209ENST00000466222 DARS2Q6PI48 645 aaKnown RBP19.07■□□□□ 0.64
CAPN3-209ENST00000466222 RTL10Q7L3V2 364 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 ZCCHC9Q8N567 271 aaKnown RBP19.07■□□□□ 0.64
CAPN3-209ENST00000466222 TAB3Q8N5C8 712 aaPredicted RBP19.07■□□□□ 0.64
CAPN3-209ENST00000466222 TBC1D31Q96DN5 1066 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 P2RY11Q96G91 374 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 TTC25Q96NG3 672 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 ELAC2Q9BQ52 826 aaKnown RBP19.07■□□□□ 0.64
CAPN3-209ENST00000466222 KLC2Q9H0B6 622 aa19.07■□□□□ 0.64
CAPN3-209ENST00000466222 CFAP73A6NFT4 308 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 SNX3O60493 162 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 TSPAN3O60637 253 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 CEBPBP17676 345 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 RBL1P28749 1068 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 PAFAH1B3Q15102 231 aaKnown RBP19.06■□□□□ 0.64
CAPN3-209ENST00000466222 KYNUQ16719 465 aa19.06■□□□□ 0.64
CAPN3-209ENST00000466222 RARS2Q5T160 578 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms