RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 RNF219Q5W0B1 726 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3GQ6DHY5 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3CQ6IPX1 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TMEM270Q6UE05 265 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 KDM7AQ6ZMT4 941 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TRIM69Q86WT6 500 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3Q8IZP1 549 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 SLC25A45Q8N413 288 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 SPAG5Q96R06 1193 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 SARDHQ9UL12 918 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 DMTF1Q9Y222 760 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 CA5BQ9Y2D0 317 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 CEP83Q9Y592 693 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 CHD5Q8TDI0 1954 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 SCN8AQ9UQD0 1980 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 J3QKU1 62 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 RNF225M0QZC1 329 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-208ENST00000465721 MAGEC1O60732 1142 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 FBXO21O94952 628 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 MT-CO3P00414 261 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 CALCAP01258 141 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 GIMD1P0DJR0 217 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 TBXAS1P24557 533 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-208ENST00000465721 RPL34P49207 117 aaKnown RBP12.14□□□□□ -0.47
CNOT4-208ENST00000465721 NUMBP49757 651 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-208ENST00000465721 CDCP2Q5VXM1 449 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 RAP1GAP2Q684P5 730 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 KRBA2Q6ZNG9 492 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 PRPF39Q86UA1 669 aaKnown RBP12.14□□□□□ -0.47
CNOT4-208ENST00000465721 CIR1Q86X95 450 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-208ENST00000465721 CCDC117Q8IWD4 279 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-208ENST00000465721 LGI2Q8N0V4 545 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 TMEM145Q8NBT3 493 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 ZNF248Q8NDW4 579 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 OR4C6Q8NH72 309 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 SLC35C1Q96A29 364 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 HSFY1Q96LI6 401 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 CAAP1Q9H8G2 361 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 NAALADL1Q9UQQ1 740 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 DOPEY2Q9Y3R5 2298 aa12.14□□□□□ -0.47
CNOT4-208ENST00000465721 LY6G6EA0A0G2JKS1 128 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 A0A1B0GVM2 712 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 DXOO77932 396 aaKnown RBP12.13□□□□□ -0.47
CNOT4-208ENST00000465721 IGLV3-25P01717 112 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 MPOP05164 745 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 PDGFRAP16234 1089 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 TACR2P21452 398 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 DGKAP23743 735 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 TMPRSS3P57727 454 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 TAS2R38P59533 333 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 DAB2P98082 770 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 E2F1Q01094 437 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 RHDQ02161 417 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 CNTN1Q12860 1018 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 SLC12A1Q13621 1099 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 CNGA2Q16280 664 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 SETMARQ53H47 684 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-208ENST00000465721 SYPL2Q5VXT5 272 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 CXorf57Q6NSI4 855 aaKnown RBP12.13□□□□□ -0.47
CNOT4-208ENST00000465721 CHSY1Q86X52 802 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 KAT5Q92993 513 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 SNX21Q969T3 373 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 WBP1Q96G27 269 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 NAF1Q96HR8 494 aaKnown RBP12.13□□□□□ -0.47
CNOT4-208ENST00000465721 ZNF578Q96N58 590 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-208ENST00000465721 SEMA4CQ9C0C4 833 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 MIS12Q9H081 205 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 GOLPH3LQ9H4A5 285 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 CPNE5Q9HCH3 593 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 UCKL1Q9NWZ5 548 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 U3KQA8 63 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 LRRK1Q38SD2 2015 aa12.13□□□□□ -0.47
CNOT4-208ENST00000465721 LRP4O75096 1905 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 TCAF2A6NFQ2 919 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 CAPN8A6NHC0 703 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 PRAMEF26H0Y7S4 382 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 OPA1O60313 960 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 APOEP02649 317 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 CKMT1AP12532 417 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 NNMTP40261 264 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 PLK1P53350 603 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 PMS1P54277 932 aaKnown RBP12.12□□□□□ -0.47
CNOT4-208ENST00000465721 GABREP78334 506 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 PITX1P78337 314 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-208ENST00000465721 SULT2A1Q06520 285 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 EIF4EBP2Q13542 120 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-208ENST00000465721 STAT4Q14765 748 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 STILQ15468 1287 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 POM121L1PQ3SYA9 428 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 TAF1BQ53T94 588 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-208ENST00000465721 ZC3H12AQ5D1E8 599 aaKnown RBP12.12□□□□□ -0.47
CNOT4-208ENST00000465721 PIP5KL1Q5T9C9 394 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 BEND5Q7L4P6 421 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 DSG4Q86SJ6 1040 aa12.12□□□□□ -0.47
CNOT4-208ENST00000465721 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
CNOT4-208ENST00000465721 OR8D1Q8WZ84 308 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms