RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ZBED5Q49AG3 693 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF394Q53GI3 561 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 MDH1BQ5I0G3 518 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 SPANXN3Q5MJ09 141 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 N4BP2L1Q5TBK1 243 aaPredicted RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 EPGNQ6UW88 154 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 ZDHHC17Q8IUH5 632 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 UNC45BQ8IWX7 931 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CERS5Q8N5B7 392 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC25A41Q8N5S1 370 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 MINDY2Q8NBR6 621 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 DDHD1Q8NEL9 900 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 PNPT1Q8TCS8 783 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 EME1Q96AY2 570 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CCDC124Q96CT7 223 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 NRBF2Q96F24 287 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 RMND5BQ96G75 393 aaPredicted RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 PRR11Q96HE9 360 aaPredicted RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CNDP2Q96KP4 475 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 SUSD3Q96L08 255 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CNBD2Q96M20 576 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 GPR101Q96P66 508 aaPredicted RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 RNF157Q96PX1 679 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 PRPF18Q99633 342 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CPNE1Q99829 537 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 ADPGKQ9BRR6 497 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF670Q9BS34 389 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 TCHPQ9BT92 498 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CDH19Q9H159 772 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 POLR3FQ9H1D9 316 aaPredicted RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 UPF3AQ9H1J1 476 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 C2orf40Q9H1Z8 148 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CLK4Q9HAZ1 481 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CYP3A43Q9HB55 503 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 TCF7L2Q9NQB0 619 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 CISHQ9NSE2 258 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 RHBDL2Q9NX52 303 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 SUCOQ9UBS9 1254 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 MARCOQ9UEW3 520 aaPredicted RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 USP18Q9UMW8 372 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 GNEQ9Y223 722 aaKnown RBP7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 BCS1LQ9Y276 419 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 TMED5Q9Y3A6 229 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 RPS6KL1Q9Y6S9 549 aa7.35□□□□□ -1.23
CLSTN1-204ENST00000464286 ELOA3CA0A087WX78 387 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 FAM170AA1A519 330 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MAGEB16A2A368 324 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 DDTLA6NHG4 134 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC15A5A6NIM6 579 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ELOA3DA6NLF2 546 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MEI4A8MW99 385 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 E5RJQ4 531 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 TRIM38O00635 465 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 PLSCR1O15162 318 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 HDAC3O15379 428 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ITM2AO43736 263 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 TRIM13O60858 407 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ATP6V1G1O75348 118 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 IL18RAPO95256 599 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 VNN1O95497 513 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 POLBP06746 335 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 APRTP07741 180 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ASNSP08243 561 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 HSPA1AP0DMV8 641 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 HSPA1BP0DMV9 641 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 FGF3P11487 239 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 FCGR1AP12314 374 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ATP6V1B1P15313 513 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 TYK2P29597 1187 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MIPP30301 263 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ATICP31939 592 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 RFC1P35251 1148 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 GRIA2P42262 883 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MAGEA3P43357 314 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ALDH3B2P48448 385 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 NUMBP49757 651 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 NUDT2P50583 147 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 TCP10Q12799 353 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 SEMA5AQ13591 1074 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 KYAT1Q16773 422 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF699Q32M78 642 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MYLK3Q32MK0 819 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF829Q3KNS6 432 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ELOA3BQ3SY89 546 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ATP13A4Q4VNC1 1196 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 MROH9Q5TGP6 573 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ARHGEF16Q5VV41 709 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 FKBP1CQ5VVH2 108 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 SEL1L3Q68CR1 1132 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 LMBRD2Q68DH5 695 aaPredicted RBP7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 PRMT9Q6P2P2 845 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 C16orf46Q6P387 395 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC39A4Q6P5W5 647 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 UNC5AQ6ZN44 842 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 Q6ZNX1 250 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 DENND5BQ6ZUT9 1274 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 NEK10Q6ZWH5 1172 aa7.34□□□□□ -1.23
CLSTN1-204ENST00000464286 ELOA3Q8NG57 546 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms