RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ERMARDQ5T6L9 678 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 C9orf64Q5T6V5 341 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 TXNRD3NBQ6F5E7 133 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 ZNF783Q6ZMS7 281 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 METTL3Q86U44 580 aaKnown RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 ALYREFQ86V81 257 aaKnown RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 KBTBD6Q86V97 674 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 FAM160A2Q8N612 972 aaPredicted RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 OR7D4Q8NG98 312 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 TBC1D31Q96DN5 1066 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 PANX2Q96RD6 677 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 SNRNP25Q9BV90 132 aaKnown RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 ACE2Q9BYF1 805 aaPredicted RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 DUSP15Q9H1R2 295 aaPredicted RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 DEF6Q9H4E7 631 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 CD93Q9NPY3 652 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 ANAPC7Q9UJX3 599 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 USP18Q9UMW8 372 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 AP4E1Q9UPM8 1137 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 SPAG17Q6Q759 2223 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 PLXND1Q9Y4D7 1925 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 WASH4PA8MWX3 477 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 BCKDHBP21953 392 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 GLDCP23378 1020 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 CDC25BP30305 580 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 SLC25A11Q02978 314 aaKnown RBP18.14■□□□□ 0.49
VPS52-214ENST00000463486 STARD3Q14849 445 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 TCEAL1Q15170 157 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 PLK5Q496M5 336 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 USP39Q53GS9 565 aaKnown RBP18.14■□□□□ 0.49
VPS52-214ENST00000463486 RWDD4Q6NW29 188 aaKnown RBP18.14■□□□□ 0.49
VPS52-214ENST00000463486 TMPRSS6Q8IU80 811 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 PSTKQ8IV42 348 aaKnown RBP18.14■□□□□ 0.49
VPS52-214ENST00000463486 OR2T3Q8NH03 318 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 ZNF564Q8TBZ8 553 aaPredicted RBP18.14■□□□□ 0.49
VPS52-214ENST00000463486 PTPRN2Q92932 1015 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 PPP1R9BQ96SB3 815 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 KCTD15Q96SI1 283 aaPredicted RBP18.14■□□□□ 0.49
VPS52-214ENST00000463486 FAM129BQ96TA1 746 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 MUC3BQ9H195 1237 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 UVRAGQ9P2Y5 699 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 SUN2Q9UH99 717 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 IP6K2Q9UHH9 426 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 VPS51Q9UID3 782 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 VPS28Q9UK41 221 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 HS3ST2Q9Y278 367 aa18.14■□□□□ 0.49
VPS52-214ENST00000463486 ATP9BO43861 1147 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 SYNCRIPO60506 623 aaKnown RBP18.13■□□□□ 0.49
VPS52-214ENST00000463486 SIN3BO75182 1162 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 CD160O95971 181 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 VAV1P15498 845 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 ACVRL1P37023 503 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 MAPKAPK2P49137 400 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 GNA12Q03113 381 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 LPAL2Q16609 132 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 RTL3Q8N8U3 475 aaKnown RBP18.13■□□□□ 0.49
VPS52-214ENST00000463486 DCAF4L2Q8NA75 395 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 CTNNBL1Q8WYA6 563 aaPredicted RBP18.13■□□□□ 0.49
VPS52-214ENST00000463486 NCAPGQ9BPX3 1015 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 KLC2Q9H0B6 622 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 RSPH9Q9H1X1 276 aaPredicted RBP18.13■□□□□ 0.49
VPS52-214ENST00000463486 PRDM16Q9HAZ2 1276 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 ITM2CQ9NQX7 267 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 USP36Q9P275 1121 aaKnown RBP18.13■□□□□ 0.49
VPS52-214ENST00000463486 BCCIPQ9P287 314 aaKnown RBP eCLIP18.13■□□□□ 0.49
VPS52-214ENST00000463486 CTTNBP2NLQ9P2B4 639 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 DNAI1Q9UI46 699 aa18.13■□□□□ 0.49
VPS52-214ENST00000463486 IGHV1OR15-9A0A0B4J2B8 117 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 TARSL2A2RTX5 802 aaKnown RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 EIF3CLB5ME19 914 aaKnown RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 MYO1FO00160 1098 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 CREB3O43889 395 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 PRPSAP2O60256 369 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 GFRA3O60609 400 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 ZNF821O75541 412 aaPredicted RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 MTA2O94776 668 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 PROSCO94903 275 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 IGLV3-19P01714 112 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 DESP17661 470 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 TGM1P22735 817 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 EPHB2P29323 1055 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 HTR7P34969 479 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 ST8SIA6P61647 398 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 RPS14P62263 151 aaKnown RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 DPYSL2Q16555 572 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 BOLA3Q53S33 107 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 KCNT1Q5JUK3 1230 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 PRR23BQ6ZRT6 265 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 TMEM139Q8IV31 216 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 PGBD3Q8N328 593 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 SH2D3CQ8N5H7 860 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 SLC35G2Q8TBE7 412 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 ARHGEF2Q92974 986 aaKnown RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 EIF3CQ99613 913 aaKnown RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 EPAS1Q99814 870 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 C2orf49Q9BVC5 232 aaPredicted RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 DHX35Q9H5Z1 703 aaKnown RBP18.12■□□□□ 0.49
VPS52-214ENST00000463486 INTUQ9ULD6 942 aa18.12■□□□□ 0.49
VPS52-214ENST00000463486 EDDM13A0A1B0GTR0 161 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms