RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 SIGLEC16A6NMB1 481 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 C4orf47A7E2U8 309 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 EIF3CLB5ME19 914 aaKnown RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 NEMP1O14524 444 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 EPHB6O15197 1021 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 FGF10O15520 208 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 TEX33O43247 280 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 CREB3O43889 395 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 MAGEC1O60732 1142 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 SIN3BO75182 1162 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 RTN2O75298 545 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 NEBLO76041 1014 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 SERPING1P05155 500 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 UNGP13051 313 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ENGP17813 658 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 XPAP23025 273 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 SLC8A1P32418 973 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 HTR7P34969 479 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 NUDT1P36639 197 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 GGCXP38435 758 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 PTGER3P43115 390 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 AFF3P51826 1226 aaKnown RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ZNF143P52747 638 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 GSCP56915 257 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 TPI1P60174 286 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 PITX1P78337 314 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ENPP2Q13822 863 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 FIGNQ5HY92 759 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 PPM1JQ5JR12 505 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 PLA2G2CQ5R387 149 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ITIH6Q6UXX5 1313 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 TMC6Q7Z403 805 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 KIAA0907Q7Z7F0 614 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ZCCHC9Q8N567 271 aaKnown RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 OR14C36Q8NHC7 312 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 WFDC5Q8TCV5 224 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 CPLX3Q8WVH0 158 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 EIF3CQ99613 913 aaKnown RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 PRMT1Q99873 361 aaKnown RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 FEM1AQ9BSK4 669 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 CNPY3Q9BT09 278 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ACE2Q9BYF1 805 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 RSPH9Q9H1X1 276 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 SMOC1Q9H4F8 434 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 HAUS4Q9H6D7 363 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ZWILCHQ9H900 591 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 AASDHPPTQ9NRN7 309 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 WSB2Q9NYS7 404 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 PPARGC1AQ9UBK2 798 aaKnown RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 MBD1Q9UIS9 605 aaPredicted RBP9.18□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3DA0A087WVF3 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3IA0A087WXS9 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3EA0A087X179 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3KA0A087X1G2 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 A0A1W2PP55 124 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 A0A1W2PQJ5 194 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 LNP1A1A4G5 178 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3FA6NER0 549 aaPredicted RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 C2CD4BA6NLJ0 364 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TTC34A8MYJ7 566 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3LB9A6J9 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 EEF2KO00418 725 aaKnown RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 KPNA3O00505 521 aaPredicted RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 ARHGAP33O14559 1287 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 SLC7A4O43246 635 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 FTLP02792 175 aaPredicted RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 PLEKP08567 350 aaPredicted RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3HP0C7X1 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 GZMAP12544 262 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 RHOQP17081 205 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 GOT1P17174 413 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 MZF1P28698 734 aaPredicted RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 EPHB2P29323 1055 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 ADRA1BP35368 520 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 ARL4AP40617 200 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 NOVA1P51513 510 aaKnown RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 ZNF135P52742 658 aaPredicted RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 PLK1P53350 603 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 COPAP53621 1224 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 ATXN1P54253 815 aaKnown RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 RPS14P62263 151 aaKnown RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 ZBED6P86452 979 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 DLG2Q15700 870 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 HADHQ16836 314 aaKnown RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 PTPRNQ16849 979 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 C15orf59Q2T9L4 293 aaPredicted RBP9.17□□□□□ -0.94
DDX39B-216ENST00000462421 CCDC14Q49A88 953 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 FSCBQ5H9T9 825 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TMEM215Q68D42 235 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3GQ6DHY5 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3CQ6IPX1 549 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TCEAL6Q6IPX3 200 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 SLC23A3Q6PIS1 610 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 MON1BQ7L1V2 547 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 MCOLN2Q8IZK6 566 aa9.17□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D3Q8IZP1 549 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms