RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 KNL1Q8NG31 2342 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 IGLV3-10A0A075B6K4 115 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 SYNJ2BP-COX16A0A087WUM0 186 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 A0A1B0GVT2 93 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 A0A1W2PPC4 97 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 LRRC10BA6NIK2 292 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 LRRC72A6NJI9 287 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 BHMG1C9JSJ3 638 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 I6L893 689 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 MID1O15344 667 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 ADCY5O95622 1261 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 CER1O95813 267 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 TOP3BO95985 862 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 ADH1BP00325 375 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 CYP1A1P04798 512 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 PDGFRAP16234 1089 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 ANP32AP39687 249 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 CSNK1EP49674 416 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 IRAK1P51617 712 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 RACK1P63244 317 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 ELAVL3Q14576 367 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 KRT31Q15323 416 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 TEAD4Q15561 434 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 TRIP6Q15654 476 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF423Q2M1K9 1284 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 KIF19Q2TAC6 998 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 NOP9Q86U38 636 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 CIR1Q86X95 450 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 MMAAQ8IVH4 418 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 NAXDQ8IW45 347 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 STK40Q8N2I9 435 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 KDF1Q8NAX2 398 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 OR52K2Q8NGK3 314 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 OR2T34Q8NGX1 318 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 GPT2Q8TD30 523 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 EPS8L1Q8TE68 723 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 RPL10LQ96L21 214 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 SPAG5Q96R06 1193 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 HAPLN3Q96S86 360 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 SCNM1Q9BWG6 230 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 TKTL2Q9H0I9 626 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 GANQ9H2C0 597 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 GAREM1Q9H706 876 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 ANLNQ9NQW6 1124 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 TM7SF3Q9NS93 570 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 COX16Q9P0S2 106 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 SERGEFQ9UGK8 458 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 NOCTQ9UK39 431 aaKnown RBP9.42□□□□□ -0.9
BRCA1-207ENST00000461798 PCOLCE2Q9UKZ9 415 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 PPM1HQ9ULR3 514 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 ANKRD6Q9Y2G4 727 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
BRCA1-207ENST00000461798 A0A1W2PP55 124 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 PES1O00541 588 aaKnown RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 MCF2LO15068 1137 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 VILLO15195 856 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 ALOX15BO15296 676 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SLC7A4O43246 635 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 DFNA5O60443 496 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 RNASEH2AO75792 299 aaKnown RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 FSBPO95073 299 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 CHRNB2P17787 502 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 TFE3P19532 575 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 MMP8P22894 467 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 FLT3P36888 993 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 CTSKP43235 329 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 STK19P49842 368 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SULT1E1P49888 294 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 JAM2P57087 298 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 RNASE9P60153 205 aaKnown RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 NOMO3P69849 1222 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 CDR2Q01850 454 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 CENPCQ03188 943 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 DEUP1Q05D60 604 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 DLG2Q15700 870 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 FAM102AQ5T9C2 384 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 TAF3Q5VWG9 929 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 FAM46CQ5VWP2 391 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 NCEH1Q6PIU2 408 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SND1Q7KZF4 910 aaKnown RBP eCLIP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SETD3Q86TU7 594 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 AADATQ8N5Z0 425 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 MSANTD4Q8NCY6 345 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 BAHD1Q8TBE0 780 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 GANCQ8TET4 914 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 ADAMTS14Q8WXS8 1223 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 GATA6Q92908 595 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 CAMK1GQ96NX5 476 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 GBP4Q96PP9 640 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 TBCBQ99426 244 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 OMDQ99983 421 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SIK2Q9H0K1 926 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 VPS16Q9H269 839 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 EBF2Q9HAK2 575 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms