RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PGM2L1Q6PCE3 622 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 ALYREFQ86V81 257 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 RASSF3Q86WH2 238 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 CRLF3Q8IUI8 442 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 CXorf38Q8TB03 319 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TTC17Q96AE7 1141 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 E2F7Q96AV8 911 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 SUSD3Q96L08 255 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 SRPK1Q96SB4 655 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TMEM121Q9BTD3 319 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TTPALQ9BTX7 342 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 IQCGQ9H095 443 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 PPARGC1AQ9UBK2 798 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 SIX4Q9UIU6 781 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 PPM1HQ9ULR3 514 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TEX264Q9Y6I9 313 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 COL4A4P53420 1690 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 MYO7AQ13402 2215 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 PRRC2BQ5JSZ5 2229 aaKnown RBP16.14■□□□□ 0.17
CMTM3-203ENST00000460097 TCRBV9S1A1TA0A576 114 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 PI4K2BG5E9Z4 385 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 KRT37O76014 449 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 CST3P01034 146 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-203ENST00000460097 ENO1P06733 434 aaKnown RBP16.14■□□□□ 0.17
CMTM3-203ENST00000460097 KRT7P08729 469 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 SNRPAP09012 282 aaKnown RBP16.14■□□□□ 0.17
CMTM3-203ENST00000460097 CDH5P33151 784 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-203ENST00000460097 TAF6P49848 677 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 ZNF252P-AS1Q0IIN9 211 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 ANKRD20A4Q4UJ75 823 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 HP1BP3Q5SSJ5 553 aaPredicted RBP16.14■□□□□ 0.17
CMTM3-203ENST00000460097 KIAA0319Q5VV43 1072 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 LLGL2Q6P1M3 1020 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 LRRC52Q8N7C0 313 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 FNIP1Q8TF40 1166 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 AUTS2Q8WXX7 1259 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 B3GALT6Q96L58 329 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 ZNF560Q96MR9 790 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 THTPAQ9BU02 230 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 EBF3Q9H4W6 596 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 ARMCX1Q9P291 453 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 IRAK3Q9Y616 596 aa16.14■□□□□ 0.17
CMTM3-203ENST00000460097 EYSQ5T1H1 3165 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 C2orf71A6NGG8 1288 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 SDR42E2A6NKP2 422 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 HIDE1A8MVS5 230 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 DENRO43583 198 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 HLA-DRAP01903 254 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 C1QAP02745 245 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 PYGLP06737 847 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 PYGBP11216 843 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 VCLP18206 1134 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 FGFR3P22607 806 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 RANBP1P43487 201 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 CHN2P52757 468 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 CREB5Q02930 508 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 BST1Q10588 318 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 TRPC3Q13507 836 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 SV2CQ496J9 727 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 SCARA3Q6AZY7 606 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 PRPF39Q86UA1 669 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 SPATA24Q86W54 205 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 GPR65Q8IYL9 337 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 MARVELD2Q8N4S9 558 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 UBR7Q8N806 425 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 DDX50Q9BQ39 737 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 HBS1LQ9Y450 684 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 KPNA7A9QM74 516 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 M0QZQ0 153 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 SYN3O14994 580 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 SPTLC1O15269 473 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 CHADO15335 359 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 LILRB3O75022 631 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 TMEM63AO94886 807 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 IFNB1P01574 187 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 CPA3P15088 417 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 PRKCHP24723 683 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 ACAT1P24752 427 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 ATP13A4Q4VNC1 1196 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 TCEAL5Q5H9L2 206 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 RTP2Q5QGT7 225 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 TDRD10Q5VZ19 366 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 DNAJC24Q6P3W2 148 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 BORAQ6PGQ7 559 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 RBM23Q86U06 439 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 APPL2Q8NEU8 664 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 RSAD2Q8WXG1 361 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 GFM2Q969S9 779 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 MRRFQ96E11 262 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 HPDLQ96IR7 371 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 SENP8Q96LD8 212 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 XPO7Q9UIA9 1087 aaKnown RBP16.13■□□□□ 0.17
CMTM3-203ENST00000460097 PCDHB8Q9UN66 801 aa16.13■□□□□ 0.17
CMTM3-203ENST00000460097 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
CMTM3-203ENST00000460097 E5RJQ4 531 aa16.12■□□□□ 0.17
CMTM3-203ENST00000460097 GOLGA8RI6L899 631 aa16.12■□□□□ 0.17
CMTM3-203ENST00000460097 WEE2P0C1S8 567 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms