RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 DPYSQ14117 519 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 TRADDQ15628 312 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 BRMS1LQ5PSV4 323 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 TEX35Q5T0J7 233 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 FBXL22Q6P050 247 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 ZC3H18Q86VM9 953 aaKnown RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 ARID3BQ8IVW6 561 aaPredicted RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 BBS7Q8IWZ6 715 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 CMTM8Q8IZV2 173 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 NPWQ8N729 165 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 ACTL9Q8TC94 416 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 RSPRY1Q96DX4 576 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 CELF6Q96J87 481 aaKnown RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 GCNAQ96QF7 691 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 SERINC2Q96SA4 455 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 AMACRQ9UHK6 382 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 ANAPC1Q9H1A4 1944 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 MTCL1Q9Y4B5 1905 aaKnown RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 TRAV19A0A0A6YYK7 116 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ZSCAN5CA6NGD5 496 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 E9PAM4 449 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 LEFTY2O00292 366 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 DAPK3O43293 454 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 RHOXF2BP0C7M4 288 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ERCC2P18074 760 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 KCNA5P22460 613 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 CCNCP24863 283 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ARL4AP40617 200 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 HARS2P49590 506 aaKnown RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 PTPN5P54829 565 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 COG7P83436 770 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 OTUD4Q01804 1114 aaKnown RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 PDK2Q15119 407 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ERCC6LQ2NKX8 1250 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 NCBP2-AS2Q69YL0 99 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 KLHDC10Q6PID8 442 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 TMEM184AQ6ZMB5 413 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 CCDC80Q76M96 950 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 CHSY1Q86X52 802 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 MAP7D3Q8IWC1 876 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ZNF683Q8IZ20 524 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 LGI2Q8N0V4 545 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ARL10Q8N8L6 244 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 SH3RF2Q8TEC5 729 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 DEPDC1BQ8WUY9 529 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 PPP2R3CQ969Q6 453 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 MAGOHBQ96A72 148 aaKnown RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 BTN2A3PQ96KV6 586 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 HAPLN3Q96S86 360 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 CDCA3Q99618 268 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 PRMT1Q99873 361 aaKnown RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 IER2Q9BTL4 223 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 LRRC1Q9BTT6 524 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 LINC00597Q9H2U6 94 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 TASP1Q9H6P5 420 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ZNF69Q9UC07 566 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 DNPEPQ9ULA0 475 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 HBS1LQ9Y450 684 aaKnown RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 MFSD11O43934 449 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ACSL4O60488 711 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 TJP3O95049 919 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ETS1P14921 441 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 OAS2P29728 719 aaKnown RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 AVPR1AP37288 418 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 TRIP13Q15645 432 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 PPP2R5EQ16537 467 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 CTC1Q2NKJ3 1217 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 INO80DQ53TQ3 878 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 BBS12Q6ZW61 710 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 SNX32Q86XE0 403 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ZNF276Q8N554 614 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 TAB3Q8N5C8 712 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 GLIS1Q8NBF1 620 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 ZSCAN18Q8TBC5 510 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 FGF13Q92913 245 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 GLMNQ92990 594 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 RELTQ969Z4 430 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 FAF2Q96CS3 445 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 PRICKLE1Q96MT3 831 aaPredicted RBP10.6□□□□□ -0.71
USP39-210ENST00000459775 ZNF670Q9BS34 389 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 DCLK3Q9C098 648 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 OSBPL2Q9H1P3 480 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 S1PR5Q9H228 398 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 PLK2Q9NYY3 685 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 DPP7Q9UHL4 492 aa10.6□□□□□ -0.71
USP39-210ENST00000459775 NCOR1O75376 2440 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 H3BRJ5 948 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 DNAJC6O75061 913 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 C1RP00736 705 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 SLC2A3P11169 496 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 TACR2P21452 398 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 FSHRP23945 695 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 RPS6KA3P51812 740 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 COPS2P61201 443 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 SLC7A9P82251 487 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 CBX1P83916 185 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms