RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 C7orf61Q8IZ16 206 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 MAGEC3Q8TD91 643 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 C1QTNF3-AMACRE9PGA6 284 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 FAM86B1E9PN63 330 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDAC7-217ENST00000459625 MTRF1O75570 445 aaKnown RBP16.3■□□□□ 0.2
HDAC7-217ENST00000459625 NTSR2O95665 410 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 HTR1BP28222 390 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 PDHA2P29803 388 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 CNTN2Q02246 1040 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 SLC22A9Q8IVM8 553 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 TSPAN14Q8NG11 270 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 SEMA6AQ9H2E6 1030 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 ASB8Q9H765 288 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 NCKIPSDQ9NZQ3 722 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 MARCH2Q9P0N8 246 aa16.3■□□□□ 0.2
HDAC7-217ENST00000459625 MMP13P45452 471 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 CXCL9Q07325 125 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 ZBTB49Q6ZSB9 765 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 REXO1L1PQ8IX06 675 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 ZNF34Q8IZ26 560 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 FAM9CQ8IZT9 166 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 LRRN4Q8WUT4 740 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 DDTLA6NHG4 134 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-217ENST00000459625 SLC1A6P48664 564 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 SNRPFP62306 86 aaKnown RBP16.29■□□□□ 0.2
HDAC7-217ENST00000459625 MAB21L3Q8N8X9 362 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 SERPINB11Q96P15 392 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 VAV3Q9UKW4 847 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 NEDD8-MDP1E9PL57 170 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 SEPT4O43236 478 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 DNTTP04053 509 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 KLHL12Q53G59 568 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 ARMC8Q8IUR7 673 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 HTATIP2Q9BUP3 242 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 CATSPERZQ9NTU4 200 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 INVSQ9Y283 1065 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 DCLK1O15075 740 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 CYP4F2P78329 520 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 CYP4F3Q08477 520 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 N4BP2L1Q5TBK1 243 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-217ENST00000459625 SCUBE1Q8IWY4 988 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 PARP8Q8N3A8 854 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 DDHD1Q8NEL9 900 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 CCDC167Q9P0B6 97 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 TP53INP1Q96A56 240 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 CDH9Q9ULB4 789 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 ZNF609O15014 1411 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 KIF21AQ7Z4S6 1674 aa16.29■□□□□ 0.2
HDAC7-217ENST00000459625 CD86P42081 329 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 PGM5Q15124 567 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 DAW1Q8N136 415 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 OR56A4Q8NGH8 313 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 IDI2Q9BXS1 227 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 IMP3Q9NV31 184 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 CIDEBQ9UHD4 219 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 HES2Q9Y543 173 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 CD3EAPO15446 510 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 KHDRBS3O75525 346 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 EPN2O95208 641 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 ERCC2P18074 760 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 ATP5C1P36542 298 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 FXR2P51116 673 aaKnown RBP eCLIP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 FASTKQ14296 549 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 FBXO30Q8TB52 745 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 PANX3Q96QZ0 392 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 SLC28A3Q9HAS3 691 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 CDHR5Q9HBB8 845 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 OSER1Q9NX31 292 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 LRCH1Q9Y2L9 728 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 A0A1B0GTH6 734 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 PIRTP0C851 137 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 TSPAN8P19075 237 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 RNASE12Q5GAN4 147 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 TAF2Q6P1X5 1199 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 SLC27A1Q6PCB7 646 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 MTDHQ86UE4 582 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 REPS2Q8NFH8 660 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 CASKIN2Q8WXE0 1202 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 COPS5Q92905 334 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 MIEF2Q96C03 454 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 EPB41L4BQ9H329 900 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 TMEM138Q9NPI0 162 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 SLC12A4Q9UP95 1085 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 S100A3P33764 101 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 IFNGR2P38484 337 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 PPATQ06203 517 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 OLFML2AQ68BL7 652 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms