RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CLEC4EQ9ULY5 219 aa11.53□□□□□ -0.56
TRAF4-206ENST00000454852 DUSP12Q9UNI6 340 aa11.53□□□□□ -0.56
TRAF4-206ENST00000454852 R3HDM2Q9Y2K5 976 aaKnown RBP11.53□□□□□ -0.56
TRAF4-206ENST00000454852 C5orf42Q9H799 3197 aa11.53□□□□□ -0.56
TRAF4-206ENST00000454852 GOLGA6L10A0A0M3HER8 536 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 BCLAF3A2AJT9 711 aaKnown RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 KRIT1O00522 736 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 PPP1R12AO14974 1030 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 MCF2LO15068 1137 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 KDELR3O43731 214 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 LIASO43766 372 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 PHF2O75151 1096 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 TULP3O75386 442 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 ZMPSTE24O75844 475 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 ITGAVP06756 1048 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 CCNCP24863 283 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 CHRNA3P32297 505 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 OPRD1P41143 372 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 FNTAP49354 379 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 DYNLT1P63172 113 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 LMAN2Q12907 356 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 PRKD1Q15139 912 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 LLGL1Q15334 1064 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 PLEKHG6Q3KR16 790 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 NPNTQ6UXI9 565 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 RALGPS2Q86X27 583 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 AHI1Q8N157 1196 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 CEP112Q8N8E3 955 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 SPATA4Q8NEY3 305 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 ST13P5Q8NFI4 369 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 CSGALNACT1Q8TDX6 532 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 CAPZA3Q96KX2 299 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 RUNDC3BQ96NL0 473 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 ZNF599Q96NL3 588 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 QKIQ96PU8 341 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 C8orf33Q9H7E9 229 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 PDFQ9HBH1 243 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 PLK2Q9NYY3 685 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 SAE1Q9UBE0 346 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-206ENST00000454852 HEY1Q9Y5J3 304 aa11.52□□□□□ -0.57
TRAF4-206ENST00000454852 MYOFQ9NZM1 2061 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 NYNRINQ9P2P1 1898 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 TICRRQ7Z2Z1 1910 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 A0A0D9SEW6 157 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 CFAP69A5D8W1 941 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 ZSCAN5CA6NGD5 496 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 MTSS1O43312 755 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 TIMM44O43615 452 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 MAFKO60675 156 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 PRAMEF11O60813 436 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 PEX11BO96011 259 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 ASGR2P07307 311 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 RBP3P10745 1247 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 PABPC1P11940 636 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 STIP1P31948 543 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 CD70P32970 193 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 CSKP41240 450 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 DGKGP49619 791 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 PAPOLAP51003 745 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 EIF3EP60228 445 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 SULT2A1Q06520 285 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 IL10RBQ08334 325 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 EIF4HQ15056 248 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 SLC45A4Q5BKX6 768 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 RNF219Q5W0B1 726 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 TIGD7Q6NT04 549 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 C12orf40Q86WS4 652 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 TP53INP2Q8IXH6 220 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 TFB1MQ8WVM0 346 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 CASKIN2Q8WXE0 1202 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 MAML1Q92585 1016 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 TTC17Q96AE7 1141 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 HAUS1Q96CS2 278 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 RTP4Q96DX8 246 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 HMCESQ96FZ2 354 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 CELF6Q96J87 481 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 VAT1Q99536 393 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 C2orf49Q9BVC5 232 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 SMARCAL1Q9NZC9 954 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 PCYOX1Q9UHG3 505 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 AMACRQ9UHK6 382 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 FEZ2Q9UHY8 353 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 IPO11Q9UI26 975 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 GGA2Q9UJY4 613 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 INTS6Q9UL03 887 aaKnown RBP11.51□□□□□ -0.57
TRAF4-206ENST00000454852 DNPEPQ9ULA0 475 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 SORCS3Q9UPU3 1222 aa11.51□□□□□ -0.57
TRAF4-206ENST00000454852 NUP205Q92621 2012 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 PRUNE2Q8WUY3 3088 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 MATN3O15232 486 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 MZF1P28698 734 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-206ENST00000454852 CTHP32929 405 aa11.5□□□□□ -0.57
TRAF4-206ENST00000454852 ACVRL1P37023 503 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms