RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CPT1BQ92523 772 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 CYP2S1Q96SQ9 504 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 AP1M1Q9BXS5 423 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 SLC39A8Q9C0K1 460 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 PABPC3Q9H361 631 aaKnown RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 GDE1Q9NZC3 331 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 ZMYM5Q9UJ78 669 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 GRID1Q9ULK0 1009 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 AP4E1Q9UPM8 1137 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 GOLGA8KD6RF30 607 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 DAPK3O43293 454 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 KDELR3O43731 214 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 ACSL4O60488 711 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 CYP17A1P05093 508 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 ADH1AP07327 375 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 PDGFRAP16234 1089 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 RHOQP17081 205 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 MAPKAPK2P49137 400 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 COPAP53621 1224 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 MRPS25P82663 173 aaKnown RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 TSPY1Q01534 308 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 MPP2Q14168 576 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 P3H1Q32P28 736 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 NAIF1Q69YI7 327 aaPredicted RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 DNAJC24Q6P3W2 148 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 YTHDF3Q7Z739 585 aaKnown RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 DAAM2Q86T65 1068 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 IGDCC3Q8IVU1 814 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 CNTN4Q8IWV2 1026 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 IFT20Q8IY31 132 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 OSCP1Q8WVF1 389 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 CTNNBL1Q8WYA6 563 aaPredicted RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 SCLT1Q96NL6 688 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 SERPINB11Q96P15 392 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 CDK5RAP1Q96SZ6 601 aaKnown RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 CDX2Q99626 313 aaPredicted RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 RPP25Q9BUL9 199 aaKnown RBP5.09□□□□□ -1.59
RIF1-207ENST00000454583 TREX1Q9NSU2 369 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 LRFN2Q9ULH4 789 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 USTQ9Y2C2 406 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 MED16Q9Y2X0 877 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 TEX264Q9Y6I9 313 aa5.09□□□□□ -1.59
RIF1-207ENST00000454583 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 EIF3HO15372 352 aaKnown RBP eCLIP5.09□□□□□ -1.65e-7■■□□□ 12.9
RIF1-207ENST00000454583 GRAP2O75791 330 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 PAPSS2O95340 614 aaPredicted RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 METTL18O95568 372 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 SOD1P00441 154 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 F9P00740 461 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 IL1BP01584 269 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 CTSLP07711 333 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 DHRS4L1P0CG22 281 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 KRT10P13645 584 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 CCNCP24863 283 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 PTPN3P26045 913 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 HLA-FP30511 346 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 EIF2DP41214 584 aaKnown RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 RGRP47804 291 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 ARCN1P48444 511 aaKnown RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 GPX6P59796 221 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 CYP4F8P98187 520 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 NIPAL4Q0D2K0 466 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 MTA1Q13330 715 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 CCINQ13939 588 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 TEAD2Q15562 447 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 DCAF6Q58WW2 860 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 TXNDC8Q6A555 127 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 PEX26Q7Z412 305 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 METTL23Q86XA0 190 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 BBS7Q8IWZ6 715 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 FBXO25Q8TCJ0 367 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 GIPC2Q8TF65 315 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 EDEM1Q92611 657 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 ZDHHC16Q969W1 377 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 ACSF2Q96CM8 615 aaPredicted RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 IMP4Q96G21 291 aaKnown RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 ATP6V1G3Q96LB4 118 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 RUNDC3BQ96NL0 473 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 RANBP9Q96S59 729 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 GABRG3Q99928 467 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 OSBPL8Q9BZF1 889 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 TKTL2Q9H0I9 626 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 TASP1Q9H6P5 420 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 CASS4Q9NQ75 786 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 TLR8Q9NR97 1041 aaKnown RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 FAM114A2Q9NRY5 505 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 ABI2Q9NYB9 513 aaPredicted RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 ZFP37Q9Y6Q3 630 aaPredicted RBP5.09□□□□□ -1.6
RIF1-207ENST00000454583 NUMBLQ9Y6R0 609 aa5.09□□□□□ -1.6
RIF1-207ENST00000454583 PCSK5Q92824 1860 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 HACD1B0YJ81 288 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 GLUD1P00367 558 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 KRT14P02533 472 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 URODP06132 367 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 TPSB2P20231 275 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 TACR2P21452 398 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 RWDD2BP57060 319 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 GBX1Q14549 363 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 TPSAB1Q15661 275 aa5.08□□□□□ -1.6
RIF1-207ENST00000454583 SPRED3Q2MJR0 410 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms