RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 TMC3Q7Z5M5 1100 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 ALYREFQ86V81 257 aaKnown RBP20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 TMC8Q8IU68 726 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 NXPE3Q969Y0 559 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 RUFY1Q96T51 708 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 KLF16Q9BXK1 252 aaPredicted RBP20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 NEUROG2Q9H2A3 272 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 KCNK12Q9HB15 430 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 ZNF334Q9HCZ1 680 aaPredicted RBP20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 TMEM248Q9NWD8 314 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 LSM7Q9UK45 103 aaKnown RBP20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 ZNF510Q9Y2H8 683 aa20.08■□□□□ 0.81
HIGD1A-204ENST00000452906 A0A0A0MRY4 1105 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 DRGXA6NNA5 263 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 PPFIA2O75334 1257 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 PDGFBP01127 241 aaPredicted RBP20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 TACR2P21452 398 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 FDFT1P37268 417 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 GARSP41250 739 aaKnown RBP20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 EPHA5P54756 1037 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 GDF10P55107 478 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 DHX9Q08211 1270 aaKnown RBP20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 AP1B1Q10567 949 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 RHBDF2Q6PJF5 856 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 ZCCHC9Q8N567 271 aaKnown RBP20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 ATPAF2Q8N5M1 289 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 SPATA13Q96N96 652 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 RPRD1AQ96P16 312 aaPredicted RBP20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 PPP1R2P1Q96PQ5 205 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 PRMT1Q99873 361 aaKnown RBP20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 TRPC7Q9HCX4 862 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 TRHDEQ9UKU6 1024 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 VANGL2Q9ULK5 521 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 DUSP12Q9UNI6 340 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 SNX10Q9Y5X0 201 aa20.07■□□□□ 0.8
HIGD1A-204ENST00000452906 TYW5A2RUC4 315 aaKnown RBP20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 C2orf78A6NCI8 922 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 CHADO15335 359 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 STC2O76061 302 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 FAM153BP0C7A2 387 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 HDCP19113 662 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 CORO1AP31146 461 aaKnown RBP20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 GBP2P32456 591 aaPredicted RBP20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 SLC7A9P82251 487 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 TCF15Q12870 199 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 FAM153CQ494X1 144 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 C5orf22Q49AR2 442 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 RNASEH2BQ5TBB1 312 aaKnown RBP20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 RAP1GAP2Q684P5 730 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 ITPRIPL1Q6GPH6 555 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 TMEM150AQ86TG1 271 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 ZNF683Q8IZ20 524 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 UMODL1-AS1Q8N2C9 162 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 TSGA13Q96PP4 275 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 CORO1BQ9BR76 489 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 LRRC3Q9BY71 257 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 FAM153AQ9UHL3 310 aa20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 XPO7Q9UIA9 1087 aaKnown RBP20.06■□□□□ 0.8
HIGD1A-204ENST00000452906 ARHGAP42A6NI28 874 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 ZNF197O14709 1029 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 EIF3HO15372 352 aaKnown RBP eCLIP20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 CCL16O15467 120 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 ZSCAN5DPP0CG00 497 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 MYL4P12829 197 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 ETS1P14921 441 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 CCNCP24863 283 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 GGCXP38435 758 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 CLCN5P51795 746 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 PMS2P54278 862 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 YBEYP58557 167 aaPredicted RBP20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 BASP1P80723 227 aaKnown RBP20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 ANO4Q32M45 955 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 ADGRF1Q5T601 910 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 FBXL22Q6P050 247 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 TRMT10CQ7L0Y3 403 aaKnown RBP20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 NLRP14Q86W24 1093 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 CCDC13Q8IYE1 715 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 NPWQ8N729 165 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 GOLGA6L1Q8N7Z2 621 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 GLIS1Q8NBF1 620 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 FATE1Q969F0 183 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 EXOC4Q96A65 974 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 P2RY11Q96G91 374 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 ATXN3LQ9H3M9 355 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 MFSD1Q9H3U5 465 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 HAUS2Q9NVX0 235 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 HPCAL4Q9UM19 191 aa20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 ZFP37Q9Y6Q3 630 aaPredicted RBP20.05■□□□□ 0.8
HIGD1A-204ENST00000452906 RNF103O00237 685 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 MAP3K6O95382 1288 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 CKMP06732 381 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 ARL4CP56559 192 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 SARNPP82979 210 aaKnown RBP20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 CDK16Q00536 496 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 PARP15Q460N3 678 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 AFMIDQ63HM1 303 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 ASTLQ6HA08 431 aaPredicted RBP20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 CENPUQ71F23 418 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 GAREM2Q75VX8 874 aa20.04■□□□□ 0.8
HIGD1A-204ENST00000452906 CHST9Q7L1S5 443 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms