RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 METTL12A8MUP2 240 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 TM4SF5O14894 197 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 BCAT2O15382 392 aaPredicted RBP9.94□□□□□ -0.82
USP54-207ENST00000451492 ENDOD1O94919 500 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 SERPINC1P01008 464 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 IGLV3-19P01714 112 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 CALB1P05937 261 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 SYPP08247 313 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 UNGP13051 313 aaPredicted RBP9.94□□□□□ -0.82
USP54-207ENST00000451492 RRM1P23921 792 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 OR1E1P30953 314 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 SLC8A1P32418 973 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 CSNK1EP49674 416 aaKnown RBP9.94□□□□□ -0.82
USP54-207ENST00000451492 SULT2A1Q06520 285 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 FOXC1Q12948 553 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 CCDC14Q49A88 953 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 FILIP1LQ4L180 1135 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 RWDD4Q6NW29 188 aaKnown RBP9.94□□□□□ -0.82
USP54-207ENST00000451492 DNAJC24Q6P3W2 148 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 NCEH1Q6PIU2 408 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 TRIM72Q6ZMU5 477 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 ADAT2Q7Z6V5 191 aaKnown RBP9.94□□□□□ -0.82
USP54-207ENST00000451492 AADATQ8N5Z0 425 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 CCDC185Q8N715 623 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 ATP11CQ8NB49 1132 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 CADM4Q8NFZ8 388 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 OR7D4Q8NG98 312 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 FAM172AQ8WUF8 416 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 NT5C3BQ969T7 300 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 BIRC7Q96CA5 298 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 PGAP3Q96FM1 320 aaPredicted RBP9.94□□□□□ -0.82
USP54-207ENST00000451492 MCEEQ96PE7 176 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 PSMB7Q99436 277 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 BPIFA3Q9BQP9 254 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 FEM1AQ9BSK4 669 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 SPON2Q9BUD6 331 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 MAGEB5Q9BZ81 275 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 NEUROG2Q9H2A3 272 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 IL21RQ9HBE5 538 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 VPS51Q9UID3 782 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.94□□□□□ -0.82
USP54-207ENST00000451492 DAAM1Q9Y4D1 1078 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 ANKRD36A6QL64 1941 aa9.94□□□□□ -0.82
USP54-207ENST00000451492 A0A0D9SEW6 157 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SPAARA0A1B0GVQ0 90 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 TARSL2A2RTX5 802 aaKnown RBP9.93□□□□□ -0.82
USP54-207ENST00000451492 C2CD4BA6NLJ0 364 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 K7ERQ8 282 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 CBX4O00257 560 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 CCP110O43303 1012 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ADH1BP00325 375 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 KRT3P12035 628 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SRCP12931 536 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 FERP16591 822 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SPINK2P20155 84 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 GPD1P21695 349 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 OXCT1P55809 520 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 KRT83P78385 493 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ZBTB16Q05516 673 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 PTP4A2Q12974 167 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 MTA1Q13330 715 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ELAVL3Q14576 367 aaKnown RBP9.93□□□□□ -0.82
USP54-207ENST00000451492 DLG2Q15700 870 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ASIC2Q16515 512 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ARL13BQ3SXY8 428 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 C6orf118Q5T5N4 469 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SCYL2Q6P3W7 929 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.93□□□□□ -0.82
USP54-207ENST00000451492 MON1BQ7L1V2 547 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 LUZP1Q86V48 1076 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ZNF354CQ86Y25 554 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ZNF683Q8IZ20 524 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SH2D3CQ8N5H7 860 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 KDM1BQ8NB78 822 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 OR14C36Q8NHC7 312 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 OR8D1Q8WZ84 308 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ALG14Q96F25 216 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 CAMK1GQ96NX5 476 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 FAM129BQ96TA1 746 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ZYG11BQ9C0D3 744 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 TNKS2Q9H2K2 1166 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SLC32A1Q9H598 525 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 SGK2Q9HBY8 427 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
USP54-207ENST00000451492 TAS2R14Q9NYV8 317 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 DNAI1Q9UI46 699 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ACTL7AQ9Y615 435 aa9.93□□□□□ -0.82
USP54-207ENST00000451492 ANKRD62A6NC57 917 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 LRRC72A6NJI9 287 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 C1QTNF3-AMACRE9PGA6 284 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 FAM72CH0Y354 149 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 KCNK3O14649 394 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 RTN2O75298 545 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 MT-CO1P00395 513 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 TNFAIP3P21580 790 aa9.92□□□□□ -0.82
USP54-207ENST00000451492 MAT2AP31153 395 aaKnown RBP9.92□□□□□ -0.82
USP54-207ENST00000451492 RFC1P35251 1148 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms