RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
SGCE-208ENST00000450385 HS3ST2Q9Y278 367 aa16.48■□□□□ 0.23
SGCE-208ENST00000450385 NYNRINQ9P2P1 1898 aaKnown RBP16.48■□□□□ 0.23
SGCE-208ENST00000450385 TTC34A8MYJ7 566 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 UNGP13051 313 aaPredicted RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 MAOBP27338 520 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 MZF1P28698 734 aaPredicted RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 PTPN9P43378 593 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 NSFP46459 744 aaKnown RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 CENPCQ03188 943 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 GRIK2Q13002 908 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 SUZ12Q15022 739 aaKnown RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 OTUD1Q5VV17 481 aaPredicted RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 FAM124AQ86V42 546 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 PHF13Q86YI8 300 aaPredicted RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 ZNF683Q8IZ20 524 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 GANCQ8TET4 914 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 FAM131CQ96AQ9 280 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 RPL10LQ96L21 214 aaKnown RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 TBCBQ99426 244 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 MIR1-1HGQ9H1L0 117 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 OSBPL2Q9H1P3 480 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 C6orf106Q9H6K1 298 aaPredicted RBP16.47■□□□□ 0.23
SGCE-208ENST00000450385 NLRC4Q9NPP4 1024 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 VPS28Q9UK41 221 aa16.47■□□□□ 0.23
SGCE-208ENST00000450385 ILVBLA1L0T0 632 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 C10orf142B7Z368 130 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 MCF2LO15068 1137 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 MID1O15344 667 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 CALB1P05937 261 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 CD59P13987 128 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 SDC4P31431 198 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 FLT3P36888 993 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 ETFBP38117 255 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 CTSOP43234 321 aaPredicted RBP16.46■□□□□ 0.23
SGCE-208ENST00000450385 GALCP54803 685 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 RACK1P63244 317 aaKnown RBP16.46■□□□□ 0.23
SGCE-208ENST00000450385 TYRO3Q06418 890 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 NCAPHQ15003 741 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 KIAA0895LQ68EN5 471 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 DBX2Q6ZNG2 339 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 MMAAQ8IVH4 418 aaKnown RBP16.46■□□□□ 0.23
SGCE-208ENST00000450385 ZCCHC9Q8N567 271 aaKnown RBP16.46■□□□□ 0.23
SGCE-208ENST00000450385 SH2D3CQ8N5H7 860 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 OR8D1Q8WZ84 308 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 CENPIQ92674 756 aaPredicted RBP16.46■□□□□ 0.23
SGCE-208ENST00000450385 BIRC7Q96CA5 298 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 VCPIP1Q96JH7 1222 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 MUC3BQ9H195 1237 aa16.46■□□□□ 0.23
SGCE-208ENST00000450385 CHD5Q8TDI0 1954 aa16.46■□□□□ 0.22
SGCE-208ENST00000450385 A0A1W2PPC4 97 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 E9PAM4 449 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 C1QTNF3-AMACRE9PGA6 284 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 RHOCP08134 193 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 DESP17661 470 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 CHRNB2P17787 502 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 OR1E1P30953 314 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 AIF1P55008 147 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
SGCE-208ENST00000450385 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 DLG2Q15700 870 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 ZNF423Q2M1K9 1284 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 APTXQ7Z2E3 356 aaKnown RBP16.45■□□□□ 0.22
SGCE-208ENST00000450385 C14orf80Q86SX3 495 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 GLRX5Q86SX6 157 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 STK40Q8N2I9 435 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 DCAF4L2Q8NA75 395 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 ADAM33Q9BZ11 813 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 ZYG11BQ9C0D3 744 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 NEUROG2Q9H2A3 272 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 ADAM22Q9P0K1 906 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 PCDHB9Q9Y5E1 797 aa16.45■□□□□ 0.22
SGCE-208ENST00000450385 A0A1W2PP55 124 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 C2CD4BA6NLJ0 364 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 SIGLEC16A6NMB1 481 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 GOLGA8SH3BPF8 625 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 RNASEH2AO75792 299 aaKnown RBP16.44■□□□□ 0.22
SGCE-208ENST00000450385 IL1BP01584 269 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 KRT3P12035 628 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 FERP16591 822 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 ADRA1BP35368 520 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 CLEC16AQ2KHT3 1053 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 ACCSLQ4AC99 568 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 RETSATQ6NUM9 610 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 NEK5Q6P3R8 708 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 CIR1Q86X95 450 aaPredicted RBP16.44■□□□□ 0.22
SGCE-208ENST00000450385 CACUL1Q86Y37 369 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 PLPP6Q8IY26 295 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 C3orf20Q8ND61 904 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 DEFB124Q8NES8 71 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 TMIEQ8NEW7 156 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 SLC20A1Q8WUM9 679 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 CFAP57Q96MR6 1250 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 CDC6Q99741 560 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 EDEM3Q9BZQ6 932 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 CEP44Q9C0F1 390 aa16.44■□□□□ 0.22
SGCE-208ENST00000450385 HSD3B7Q9H2F3 369 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms