RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 AHI1Q8N157 1196 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 CPXM2Q8N436 756 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 OR14C36Q8NHC7 312 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 CYB5D2Q8WUJ1 264 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 KLHDC7BQ96G42 594 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 SNX25Q9H3E2 840 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 NEUROD4Q9HD90 331 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 GDF2Q9UK05 429 aaPredicted RBP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 ODF2LQ9ULJ1 636 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 PHTF1Q9UMS5 762 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 STYXL1Q9Y6J8 313 aa8.21□□□□□ -1.1
LINC01961-201ENST00000449954 DNMT3AQ9Y6K1 912 aaPredicted RBP8.21□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3DA0A087WVF3 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3IA0A087WXS9 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3EA0A087X179 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3KA0A087X1G2 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 CPED1A4D0V7 1026 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3FA6NER0 549 aaPredicted RBP8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3LB9A6J9 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TACC1O75410 805 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBX18O95935 607 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TMEM191BP0C7N4 346 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3HP0C7X1 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 GOT1P17174 413 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 PTPN1P18031 435 aaKnown RBP8.2□□□□□ -1.1
LINC01961-201ENST00000449954 MLLT10P55197 1068 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 PPP2CBP62714 309 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 PPP2CAP67775 309 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 STK3Q13188 491 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 DHX8Q14562 1220 aaKnown RBP8.2□□□□□ -1.1
LINC01961-201ENST00000449954 POSTNQ15063 836 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 NR0B2Q15466 257 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 BMT2Q1RMZ1 405 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 SETMARQ53H47 684 aaPredicted RBP8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3GQ6DHY5 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3CQ6IPX1 549 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 CRELD2Q6UXH1 353 aaPredicted RBP8.2□□□□□ -1.1
LINC01961-201ENST00000449954 CHST9Q7L1S5 443 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 BRSK2Q8IWQ3 736 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TBC1D3Q8IZP1 549 aaPredicted RBP8.2□□□□□ -1.1
LINC01961-201ENST00000449954 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.2□□□□□ -1.1
LINC01961-201ENST00000449954 IGSF22Q8N9C0 903 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 DDI1Q8WTU0 396 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 EDARADDQ8WWZ3 215 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 TMEM159Q96B96 161 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 EPB41L5Q9HCM4 733 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 ARHGAP20Q9P2F6 1191 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 CYTH4Q9UIA0 394 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 SIX4Q9UIU6 781 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 SALL4Q9UJQ4 1053 aa8.2□□□□□ -1.1
LINC01961-201ENST00000449954 HIVEP3Q5T1R4 2406 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 SERTM1A2A2V5 107 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 PRR19A6NJB7 356 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 CLDN5O00501 218 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 HNRNPRO43390 633 aaKnown RBP8.19□□□□□ -1.1
LINC01961-201ENST00000449954 FAM163BP0C2L3 166 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 C5AR1P21730 350 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 HLA-FP30511 346 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 SLC8A1P32418 973 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 GNL1P36915 607 aaPredicted RBP8.19□□□□□ -1.1
LINC01961-201ENST00000449954 EPHA4P54764 986 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 ZNF445P59923 1031 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 ST8SIA6P61647 398 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 COG7P83436 770 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 TNP2Q05952 138 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 EHHADHQ08426 723 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 SEPT6Q14141 434 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 HNRNPA1L2Q32P51 320 aaKnown RBP8.19□□□□□ -1.1
LINC01961-201ENST00000449954 DCAF6Q58WW2 860 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 C1orf229Q6ZS94 237 aaPredicted RBP8.19□□□□□ -1.1
LINC01961-201ENST00000449954 FAM35AQ86V20 835 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 ADIPOR2Q86V24 386 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 TRIM69Q86WT6 500 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 GOLGA6L1Q8N7Z2 621 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 SYT2Q8N9I0 419 aaPredicted RBP8.19□□□□□ -1.1
LINC01961-201ENST00000449954 TEX19Q8NA77 164 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 TMEM145Q8NBT3 493 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 B3GALNT2Q8NCR0 500 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 GPBAR1Q8TDU6 330 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 POMGNT1Q8WZA1 660 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 SMARCD1Q96GM5 515 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 HPDLQ96IR7 371 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 CDK5RAP1Q96SZ6 601 aaKnown RBP8.19□□□□□ -1.1
LINC01961-201ENST00000449954 KCNK16Q96T55 309 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 B3GNT5Q9BYG0 378 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 MTMR12Q9C0I1 747 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 B3GNT4Q9C0J1 378 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 SEL1LQ9UBV2 794 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 PISDQ9UG56 409 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 GGA2Q9UJY4 613 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 CLEC4EQ9ULY5 219 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 CSNK1G3Q9Y6M4 447 aa8.19□□□□□ -1.1
LINC01961-201ENST00000449954 NIPBLQ6KC79 2804 aaeCLIP8.19□□□□□ -1.1
LINC01961-201ENST00000449954 MED13LQ71F56 2210 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 PRAMEF33A0A0G2JMD5 474 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ZNF891A8MT65 544 aaPredicted RBP8.18□□□□□ -1.1
LINC01961-201ENST00000449954 ANKRD63C9JTQ0 380 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 D6RAR5 112 aa8.18□□□□□ -1.1
LINC01961-201ENST00000449954 STMND1H3BQB6 276 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms