RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 IMPAD1Q9NX62 359 aa10.59□□□□□ -0.71
CTC1-202ENST00000449476 NOCTQ9UK39 431 aaKnown RBP10.59□□□□□ -0.71
CTC1-202ENST00000449476 FGF10O15520 208 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 CCNT2O60583 730 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 MYL4P12829 197 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 HOXB8P17481 243 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 NUP107P57740 925 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 ZFP1Q6P2D0 407 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 USP50Q70EL3 339 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 HERC6Q8IVU3 1022 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 SOCS4Q8WXH5 440 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 NKD2Q969F2 451 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 KCTD14Q9BQ13 255 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 POLR1EQ9GZS1 481 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 BCAS3Q9H6U6 928 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 NMRK1Q9NWW6 199 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 SLC17A7Q9P2U7 560 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 MORF4L1Q9UBU8 362 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 F8W810 466 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 SYNCRIPO60506 623 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 HOXC6P09630 235 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 CCNB1P14635 433 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 HALP42357 657 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 NEK2P51955 445 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 ATN1P54259 1190 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 EPHB3P54753 998 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 PCBP1Q15365 356 aaKnown RBP eCLIP10.58□□□□□ -0.72
CTC1-202ENST00000449476 ZNF284Q2VY69 593 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 IRGCQ6NXR0 463 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 LBX2Q6XYB7 198 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 GLT6D1Q7Z4J2 308 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 CLEC4DQ8WXI8 215 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 FAM120BQ96EK7 910 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 SPATA16Q9BXB7 569 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 EMILIN2Q9BXX0 1053 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 FBXO6Q9NRD1 293 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 PAPOLBQ9NRJ5 636 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 CDH9Q9ULB4 789 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 FAM208AQ9UK61 1670 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 TBKBP1A7MCY6 615 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 CLDN5O00501 218 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 KDM1AO60341 852 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 DAB1O75553 588 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 RTN3O95197 1032 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 KRT6AP02538 564 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 KRT6BP04259 564 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 ZNF7P17097 686 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 KRT6CP48668 564 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 MRPS22P82650 360 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 ILF2Q12905 390 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 HOMEZQ8IX15 550 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 PLEKHA8Q96JA3 519 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 MRPL45Q9BRJ2 306 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 ACE2Q9BYF1 805 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 DPY30Q9C005 99 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 UBA2Q9UBT2 640 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 SEPT3Q9UH03 358 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 BTN3A1O00481 513 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 SMNDC1O75940 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
CTC1-202ENST00000449476 CCDC166P0CW27 439 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 NCALDP61601 193 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 MRPS5P82675 430 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 SLC20A2Q08357 652 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 PGS1Q32NB8 556 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 PREPLQ4J6C6 727 aaPredicted RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 SAMD4BQ5PRF9 694 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 LCLAT1Q6UWP7 414 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 FAM126BQ8IXS8 530 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 PCDH20Q8N6Y1 951 aaKnown RBP10.58□□□□□ -0.72
CTC1-202ENST00000449476 P2RY11Q96G91 374 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 MECRQ9BV79 373 aa10.58□□□□□ -0.72
CTC1-202ENST00000449476 TTLL13PA6NNM8 815 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 BUD23O43709 281 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 LZTS3O60299 673 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 ZNF682O95780 498 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CHRNB2P17787 502 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CDC25CP30307 473 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 CDKN2BP42772 138 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 RUNX1T1Q06455 604 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 TRAF2Q12933 501 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 MTA1Q13330 715 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 XRCC4Q13426 336 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 OTUD3Q5T2D3 398 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 SLC41A1Q8IVJ1 513 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 OR56A4Q8NGH8 313 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 ZSCAN18Q8TBC5 510 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 FNIP1Q8TF40 1166 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 NXF3Q9H4D5 531 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 DDX28Q9NUL7 540 aaKnown RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 SLC25A13Q9UJS0 675 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 A0A087X1B8 175 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 PSMD12O00232 456 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 RAD51BO15315 384 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
CTC1-202ENST00000449476 FMO4P31512 558 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 ARL2P36404 184 aa10.57□□□□□ -0.72
CTC1-202ENST00000449476 RAD23AP54725 363 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms