RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FAM83CQ9BQN1 747 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 RHOXF2Q9BQY4 288 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.73■□□□□ 0.75
RPS28-202ENST00000449223 UTP11Q9Y3A2 253 aaKnown RBP19.73■□□□□ 0.75
RPS28-202ENST00000449223 WNT6Q9Y6F9 365 aa19.73■□□□□ 0.75
RPS28-202ENST00000449223 V9GYY5 206 aaPredicted RBP19.73■□□□□ 0.75
RPS28-202ENST00000449223 GRXCR2A6NFK2 248 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 H3BQ06 376 aaPredicted RBP19.72■□□□□ 0.75
RPS28-202ENST00000449223 DFFAO00273 331 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 KCNN4O15554 427 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 ECI2O75521 394 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 GCATO75600 419 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 GBP2P32456 591 aaPredicted RBP19.72■□□□□ 0.75
RPS28-202ENST00000449223 OXCT1P55809 520 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 MRPS25P82663 173 aaKnown RBP19.72■□□□□ 0.75
RPS28-202ENST00000449223 SLC7A5Q01650 507 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 PPP1R7Q15435 360 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 TIGD7Q6NT04 549 aaPredicted RBP19.72■□□□□ 0.75
RPS28-202ENST00000449223 WDR93Q6P2C0 686 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 RHBDF2Q6PJF5 856 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 TPGS1Q6ZTW0 290 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 MTSS1LQ765P7 747 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 TMEM25Q86YD3 366 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 CCDC13Q8IYE1 715 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 GLIS1Q8NBF1 620 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 NETO2Q8NC67 525 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 CCNYQ8ND76 341 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 OR52K2Q8NGK3 314 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 DEPDC1BQ8WUY9 529 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 HMCESQ96FZ2 354 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 VAT1Q99536 393 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 TRIM51Q9BSJ1 452 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 ACE2Q9BYF1 805 aaPredicted RBP19.72■□□□□ 0.75
RPS28-202ENST00000449223 C10orf88Q9H8K7 445 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 GDF3Q9NR23 364 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 THG1LQ9NWX6 298 aaKnown RBP19.72■□□□□ 0.75
RPS28-202ENST00000449223 DUS2Q9NX74 493 aaKnown RBP19.72■□□□□ 0.75
RPS28-202ENST00000449223 MYOFQ9NZM1 2061 aa19.72■□□□□ 0.75
RPS28-202ENST00000449223 CXorf51AA0A1B0GTR3 108 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 ANHXE9PGG2 379 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 H0Y626 953 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 HOXC11O43248 304 aaPredicted RBP19.71■□□□□ 0.75
RPS28-202ENST00000449223 MBTPS2O43462 519 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 KRT14P02533 472 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 RHOCP08134 193 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 KCNA5P22460 613 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 IVDP26440 423 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 TNFRSF8P28908 595 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 IFI35P80217 286 aaPredicted RBP19.71■□□□□ 0.75
RPS28-202ENST00000449223 TNK2Q07912 1038 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 AP1B1Q10567 949 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 WASHC5Q12768 1159 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 SLC12A1Q13621 1099 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 CDH18Q13634 790 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 PDGFRLQ15198 375 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 LY6G5CQ5SRR4 150 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 C4orf22Q6V702 233 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 MFN1Q8IWA4 741 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 CCDC33Q8N5R6 958 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 EIF1ADQ8N9N8 165 aaKnown RBP19.71■□□□□ 0.75
RPS28-202ENST00000449223 MAML1Q92585 1016 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 ATP2A3Q93084 1043 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 ASIC4Q96FT7 647 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 LMLNQ96KR4 655 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 IPO11Q9UI26 975 aaKnown RBP19.71■□□□□ 0.75
RPS28-202ENST00000449223 OR51B4Q9Y5P0 310 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 COL4A3Q01955 1670 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.71■□□□□ 0.75
RPS28-202ENST00000449223 A0A0D9SEW6 157 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 MATN3O15232 486 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 NFATC1O95644 943 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 PEX11BO96011 259 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 CYP17A1P05093 508 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 IFNAR2P48551 515 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 GUCY2DQ02846 1103 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 IL10RBQ08334 325 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 NAA30Q147X3 362 aaPredicted RBP19.71■□□□□ 0.75
RPS28-202ENST00000449223 DHCR24Q15392 516 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 ELF2Q15723 593 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 FSCBQ5H9T9 825 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 ARHGAP36Q6ZRI8 547 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 CARNMT1Q8N4J0 409 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 WFDC5Q8TCV5 224 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 FGF14Q92915 247 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 ALG14Q96F25 216 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 BBS2Q9BXC9 721 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 SLC2A11Q9BYW1 496 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 PDFQ9HBH1 243 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 FBXO10Q9UK96 956 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 RAB21Q9UL25 225 aa19.71■□□□□ 0.75
RPS28-202ENST00000449223 A0A0A0MRY4 1105 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 ZSCAN5CA6NGD5 496 aaPredicted RBP19.7■□□□□ 0.74
RPS28-202ENST00000449223 PRAMEF11O60813 436 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 OPHN1O60890 802 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 ADH1CP00326 375 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 IFNB1P01574 187 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 PSMC3P17980 439 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 ACVRL1P37023 503 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 CLCN6P51797 869 aa19.7■□□□□ 0.74
RPS28-202ENST00000449223 HNRNPDQ14103 355 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms