RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 RTL3Q8N8U3 475 aaKnown RBP7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF557Q8N988 423 aaPredicted RBP7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 PCDH19Q8TAB3 1148 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 WFDC5Q8TCV5 224 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 EDAQ92838 391 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 MSANTD3Q96H12 275 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 RBM41Q96IZ5 413 aaKnown RBP7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 PNKPQ96T60 521 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 P2RY13Q9BPV8 354 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF670Q9BS34 389 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 FEM1AQ9BSK4 669 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 MAK16Q9BXY0 300 aaKnown RBP7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 PRDM16Q9HAZ2 1276 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 FBRSL1Q9HCM7 1045 aaKnown RBP7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 ARHGEF4Q9NR80 690 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 NDFIP2Q9NV92 336 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 DNAJC17Q9NVM6 304 aaKnown RBP7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 DONSONQ9NYP3 566 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 KIAA1522Q9P206 1035 aaPredicted RBP7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 DNAI1Q9UI46 699 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 FBXL21Q9UKT6 434 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 CA14Q9ULX7 337 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 SLC27A6Q9Y2P4 619 aa7.75□□□□□ -1.17
AC004540.1-206ENST00000448056 ILVBLA1L0T0 632 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 TBC1D3BA6NDS4 549 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 MAN2B1O00754 1011 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 KCNK3O14649 394 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ENC1O14682 589 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 TIMM44O43615 452 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 KAT7O95251 611 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 KRT10P13645 584 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 CD72P21854 359 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 MZF1P28698 734 aaPredicted RBP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 HLA-FP30511 346 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 CD70P32970 193 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 GRIA2P42262 883 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 TNFRSF4P43489 277 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 MAPKAPK2P49137 400 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 DNA2P51530 1060 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 NDST2P52849 883 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 STARD6P59095 220 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 GNA12Q03113 381 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 GRSF1Q12849 480 aaKnown RBP eCLIP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 LMAN2Q12907 356 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF211Q13398 564 aaPredicted RBP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 SLC12A1Q13621 1099 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 PON2Q15165 354 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 LLGL1Q15334 1064 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 TFDP3Q5H9I0 405 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 TMEM196Q5HYL7 178 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 DCAF12L1Q5VU92 463 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 RNF219Q5W0B1 726 aaPredicted RBP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 AFMIDQ63HM1 303 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 GRAMD4Q6IC98 578 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 AADACL2Q6P093 401 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 C1orf228Q6PIY5 440 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF852Q6ZMS4 543 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF783Q6ZMS7 281 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 TPRG1Q6ZUI0 275 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 CCDC50Q8IVM0 306 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 SUGP1Q8IWZ8 645 aaKnown RBP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 SIX5Q8N196 739 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 PHTF2Q8N3S3 785 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 LZTR1Q8N653 840 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 OR52K2Q8NGK3 314 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 FAM3CQ92520 227 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 EXOC4Q96A65 974 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ALG14Q96F25 216 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 SHDQ96IW2 340 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 WDR24Q96S15 920 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 KLC2Q9H0B6 622 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 MAGEH1Q9H213 219 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 NOL6Q9H6R4 1146 aaKnown RBP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ARHGEF3Q9NR81 526 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ABCB8Q9NUT2 735 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 ETNK2Q9NVF9 386 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 GGA2Q9UJY4 613 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 EFR3BQ9Y2G0 817 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 FCF1Q9Y324 198 aaKnown RBP7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 MFHAS1Q9Y4C4 1052 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 OR51B4Q9Y5P0 310 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 TRIOO75962 3097 aa7.74□□□□□ -1.17
AC004540.1-206ENST00000448056 hCG_1818297A0A087WSY0 165 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 A0A0D9SEW6 157 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 PRRT4C9JH25 899 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 K7EQS6 105 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 DCXO43602 365 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 CST8O60676 142 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 RAMP2O60895 175 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 ATP1A1P05023 1023 aaKnown RBP7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 APODP05090 189 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 RHOCP08134 193 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 PABPC1P11940 636 aaKnown RBP7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 ALADP13716 330 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 ZFXP17010 805 aaPredicted RBP7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 DRD1P21728 446 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 CXCR5P32302 372 aa7.73□□□□□ -1.17
AC004540.1-206ENST00000448056 PTPN7P35236 360 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms