RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 DSG4Q86SJ6 1040 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 OR52K2Q8NGK3 314 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 RXFP2Q8WXD0 754 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 PTPRN2Q92932 1015 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 BIRC7Q96CA5 298 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 HAPLN3Q96S86 360 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 PCDHB18PQ96TA0 734 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 FAM129BQ96TA1 746 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 BPIFA3Q9BQP9 254 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 MPP6Q9NZW5 540 aa20.63■□□□□ 0.89
LRCH3-208ENST00000443727 LRRC72A6NJI9 287 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 E9PAM4 449 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 I6L893 689 aaPredicted RBP20.62■□□□□ 0.89
LRCH3-208ENST00000443727 CALB1P05937 261 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 VAV1P15498 845 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 C5AR1P21730 350 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 AFF3P51826 1226 aaKnown RBP20.62■□□□□ 0.89
LRCH3-208ENST00000443727 TEAD4Q15561 434 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 CLEC16AQ2KHT3 1053 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 ARL13BQ3SXY8 428 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 FILIP1LQ4L180 1135 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 C6orf118Q5T5N4 469 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 APTXQ7Z2E3 356 aaKnown RBP20.62■□□□□ 0.89
LRCH3-208ENST00000443727 OR8D1Q8WZ84 308 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 ALG14Q96F25 216 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 C2orf49Q9BVC5 232 aaPredicted RBP20.62■□□□□ 0.89
LRCH3-208ENST00000443727 NEUROG2Q9H2A3 272 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 DNAAF2Q9NVR5 837 aaKnown RBP20.62■□□□□ 0.89
LRCH3-208ENST00000443727 SERGEFQ9UGK8 458 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 ANGPTL2Q9UKU9 493 aa20.62■□□□□ 0.89
LRCH3-208ENST00000443727 DRGXA6NNA5 263 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 BNIP3LO60238 219 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 KRT3P12035 628 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 UNGP13051 313 aaPredicted RBP20.61■□□□□ 0.89
LRCH3-208ENST00000443727 FERP16591 822 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 OR1E1P30953 314 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 SEMA3BQ13214 749 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 DLG2Q15700 870 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 C15orf59Q2T9L4 293 aaPredicted RBP20.61■□□□□ 0.89
LRCH3-208ENST00000443727 KIAA0895LQ68EN5 471 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 IL27RAQ6UWB1 636 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 SETD3Q86TU7 594 aaPredicted RBP20.61■□□□□ 0.89
LRCH3-208ENST00000443727 ZNF683Q8IZ20 524 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 AGPAT1Q99943 283 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 SELENOOQ9BVL4 669 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 FZD4Q9ULV1 537 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 OR51B4Q9Y5P0 310 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 ADAMTS9Q9P2N4 1935 aa20.61■□□□□ 0.89
LRCH3-208ENST00000443727 ASCC3Q8N3C0 2202 aaKnown RBP20.6■□□□□ 0.89
LRCH3-208ENST00000443727 ANKRD62A6NC57 917 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 UPK3BL1B0FP48 263 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 UPK3BL2E5RIL1 263 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 ATP9BO43861 1147 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 GJB6O95452 261 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 GOT1P17174 413 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 CD27P26842 260 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 CSNK1EP49674 416 aaKnown RBP20.6■□□□□ 0.89
LRCH3-208ENST00000443727 ZNF165P49910 485 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 VASPP50552 380 aaPredicted RBP20.6■□□□□ 0.89
LRCH3-208ENST00000443727 GALCP54803 685 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 CCDC14Q49A88 953 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 FAM46CQ5VWP2 391 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 NCEH1Q6PIU2 408 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 BNIPLQ7Z465 357 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 PHF13Q86YI8 300 aaPredicted RBP20.6■□□□□ 0.89
LRCH3-208ENST00000443727 ATP11CQ8NB49 1132 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 OR14C36Q8NHC7 312 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 JOSD2Q8TAC2 188 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 FRS2Q8WU20 508 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 SPON2Q9BUD6 331 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 ZYG11BQ9C0D3 744 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 ADAMTS1Q9UHI8 967 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 FARP1Q9Y4F1 1045 aaPredicted RBP20.6■□□□□ 0.89
LRCH3-208ENST00000443727 NUMA1Q14980 2115 aa20.6■□□□□ 0.89
LRCH3-208ENST00000443727 PCDH15Q96QU1 1955 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 IGLV3-10A0A075B6K4 115 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 A0A1B0GVT2 93 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 C2CD4BA6NLJ0 364 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 TEX33O43247 280 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 SNAP91O60641 907 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 ENDOD1O94919 500 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 CER1O95813 267 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 PMLP29590 882 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 SLC14A1Q13336 389 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 DNAJC24Q6P3W2 148 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 Q6ZVU0 165 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 ADAT2Q7Z6V5 191 aaKnown RBP20.59■□□□□ 0.89
LRCH3-208ENST00000443727 PIP4P1Q86T03 277 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 SH2D3CQ8N5H7 860 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 AADATQ8N5Z0 425 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 OR2T34Q8NGX1 318 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 C1orf216Q8TAB5 229 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 CCDC114Q96M63 670 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 CNTNAP3BQ96NU0 1288 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 CNTNAP3Q9BZ76 1288 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 GAREM1Q9H706 876 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 TM9SF3Q9HD45 589 aa20.59■□□□□ 0.89
LRCH3-208ENST00000443727 RTN4Q9NQC3 1192 aaKnown RBP20.59■□□□□ 0.89
LRCH3-208ENST00000443727 A0A0D9SEW6 157 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 RFC1P35251 1148 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms