RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZSCAN5CA6NGD5 496 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 NPY2RP49146 381 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 RPS7P62081 194 aaKnown RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 CES3Q6UWW8 571 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 HMGB4Q8WW32 186 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 TADA1Q96BN2 335 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 IL12RB2Q99665 862 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 ZMYM5Q9UJ78 669 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 RHPN2P1A8MT19 583 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 BTN3A1O00481 513 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 CDH2P19022 906 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 TLX1P31314 330 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 CLEC4FQ8N1N0 589 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 C3orf20Q8ND61 904 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 ARHGEF4Q9NR80 690 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 IMP3Q9NV31 184 aaKnown RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 HACD1B0YJ81 288 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 GOLGA8TH3BQL2 631 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 CCNE2O96020 404 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 ATP6V1C1P21283 382 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 PPP1R26Q5T8A7 1209 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 ZNF555Q8NEP9 628 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 ILKAPQ9H0C8 392 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 PHPT1Q9NRX4 125 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 MPP6Q9NZW5 540 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 NCDNQ9UBB6 729 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 NAALADL1Q9UQQ1 740 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 ENTPD4Q9Y227 616 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 A0A0B4J269 797 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 AKAP10O43572 662 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 DGKAP23743 735 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 MRPS5P82675 430 aaKnown RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 PPP3CAQ08209 521 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 STK40Q8N2I9 435 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 ICA1LQ8NDH6 482 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 GTF2IRD1Q9UHL9 959 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 ATP6V1HQ9UI12 483 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 XPO1O14980 1071 aaKnown RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 USP12O75317 370 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 C2orf27AQ580R0 203 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 PAGE2BQ5JRK9 111 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 ZCCHC8Q6NZY4 707 aaKnown RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 FAM9CQ8IZT9 166 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 MTFMTQ96DP5 389 aaKnown RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 SEMA3CQ99985 751 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 PLAGL2Q9UPG8 496 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 LTBP3Q9NS15 1303 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 H3BM21 787 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 ACSL4O60488 711 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 CXCR2P25025 360 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 MAT2AP31153 395 aaKnown RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 RFC2P35250 354 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 CAP1Q01518 475 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 NR6A1Q15406 480 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 FBXO46Q6PJ61 603 aaPredicted RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 SLC35C1Q96A29 364 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 PHF21BQ96EK2 531 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 VCPIP1Q96JH7 1222 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 TLR9Q9NR96 1032 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 GNPTGQ9UJJ9 305 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 RAD54BQ9Y620 910 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 PFKMP08237 780 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 DGKGP49619 791 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 ERFP50548 548 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 CASP5P51878 434 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 INTS6LQ5JSJ4 861 aaKnown RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 FBXO39Q8N4B4 442 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 OR2W6PQ8NHA6 318 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 VAT1Q99536 393 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 SMAD5Q99717 465 aaKnown RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 TRMT61BQ9BVS5 477 aaKnown RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 SOCS7O14512 581 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 OR10H2O60403 315 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 SEC24DO94855 1032 aaPredicted RBP12.3□□□□□ -0.44
NEK1-201ENST00000439128 FOSL2P15408 326 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 PPP2R1BP30154 601 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 TIE1P35590 1138 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 MGAT5Q09328 741 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 ABRQ12979 859 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 GSTA3Q16772 222 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 TIGD5Q53EQ6 642 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 ARMCX6Q7L4S7 300 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 VN1R5Q7Z5H4 357 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 EFCAB3Q8N7B9 438 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 BADQ92934 168 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 FEM1CQ96JP0 617 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 PDZD7Q9H5P4 517 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEK1-201ENST00000439128 CPQQ9Y646 472 aa12.3□□□□□ -0.44
NEK1-201ENST00000439128 STBD1O95210 358 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 VIPP01282 170 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 FTH1P02794 183 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 MAXP61244 160 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 701.1 ms