RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ARHGAP15Q53QZ3 475 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ODF2Q5BJF6 829 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 MS4A13Q5J8X5 152 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 NUGGCQ68CJ6 796 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC9A4Q6AI14 798 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 RFX8Q6ZV50 586 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CTAGE6Q86UF2 777 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 RFX6Q8HWS3 928 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 DENND1CQ8IV53 801 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 UNC45BQ8IWX7 931 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CTAGE4Q8IX94 777 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CMTM8Q8IZV2 173 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 PLD5Q8N7P1 536 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 CEP112Q8N8E3 955 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ATP6V0D2Q8N8Y2 350 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 NOA1Q8NC60 698 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 MNS1Q8NEH6 495 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ING5Q8WYH8 240 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 USP13Q92995 863 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 AZIN2Q96A70 460 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 PLD4Q96BZ4 506 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 MYEOVQ96EZ4 313 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SEC16BQ96JE7 1060 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 BTN2A3PQ96KV6 586 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 NAP1L3Q99457 506 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SPON2Q9BUD6 331 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 MAK16Q9BXY0 300 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ADAM7Q9H2U9 754 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 LIN7BQ9HAP6 207 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ARHGEF4Q9NR80 690 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 RBM12Q9NTZ6 932 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ETNK2Q9NVF9 386 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 RCOR3Q9P2K3 495 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SAE1Q9UBE0 346 aaPredicted RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC12A6Q9UHW9 1150 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 AGO1Q9UL18 857 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 ARHGAP26Q9UNA1 814 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 MRPS23Q9Y3D9 190 aaKnown RBP7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 MFHAS1Q9Y4C4 1052 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 PTPRDP23468 1912 aa7.25□□□□□ -1.25
LSM3P3-201ENST00000436601 PLXNA3P51805 1871 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 IGLV3-10A0A075B6K4 115 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 TMEM238LA0A1B0GVL6 79 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 DRGXA6NNA5 263 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 E9PAM4 449 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 LEFTY2O00292 366 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 EEF2KO00418 725 aaKnown RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 GFRA2O00451 464 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 DCLK1O15075 740 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 ACSL4O60488 711 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 MAP3K6O95382 1288 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 PRAMEF12O95522 483 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 CKMP06732 381 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 SRGAP2BP0DMP2 458 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 IRF1P10914 325 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 PECAM1P16284 738 aaPredicted RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 ERCC2P18074 760 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 TACR2P21452 398 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 EPHB2P29323 1055 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 CORO1AP31146 461 aaKnown RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 HOXC13P31276 330 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 ARL4AP40617 200 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC11A2P49281 568 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 HARS2P49590 506 aaKnown RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 IRAK1P51617 712 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 ZNF135P52742 658 aaPredicted RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 TPI1P60174 286 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 DYNLT1P63172 113 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 GBE1Q04446 702 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 SFSWAPQ12872 951 aaKnown RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 HYAL2Q12891 473 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 SLC10A2Q12908 348 aaPredicted RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 MTA1Q13330 715 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 TFDP2Q14188 446 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 C5orf22Q49AR2 442 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 FAM133BQ5BKY9 247 aaKnown RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 RAP1GAP2Q684P5 730 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 NCBP2-AS2Q69YL0 99 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 FBXL22Q6P050 247 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 TTC27Q6P3X3 843 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 C1orf228Q6PIY5 440 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 NPNTQ6UXI9 565 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 Q6ZNB5 142 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 HTR3DQ70Z44 454 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 KLHL7Q8IXQ5 586 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 MMGT1Q8N4V1 131 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 C12orf50Q8NA57 414 aaPredicted RBP7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 RIN3Q8TB24 985 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 C1orf54Q8WWF1 131 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 ATG4AQ8WYN0 398 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 IGSF8Q969P0 613 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 MSLNLQ96KJ4 702 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 FAM118BQ9BPY3 351 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 DCLK3Q9C098 648 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 KLC2Q9H0B6 622 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 LRRC19Q9H756 370 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 LATS2Q9NRM7 1088 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 CLDND1Q9NY35 253 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 CFAP97Q9P2B7 532 aa7.24□□□□□ -1.25
LSM3P3-201ENST00000436601 STOML2Q9UJZ1 356 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms