RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 MARCH8Q5T0T0 291 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 LRRC38Q5VT99 294 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 PLEKHA7Q6IQ23 1121 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 LLGL2Q6P1M3 1020 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 SPOCD1Q6ZMY3 1216 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 FRMD7Q6ZUT3 714 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 SLC26A11Q86WA9 606 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 NPAS4Q8IUM7 802 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 XXYLT1Q8NBI6 393 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 NLRP7Q8WX94 980 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 WNT8BQ93098 351 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 TOP1MTQ969P6 601 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 ISOC1Q96CN7 298 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 PLEKHA8Q96JA3 519 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 NT5C1BQ96P26 610 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 YME1L1Q96TA2 773 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 RTKNQ9BST9 563 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 NIFKQ9BYG3 293 aaKnown RBP7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 FAM49AQ9H0Q0 323 aaPredicted RBP7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 LMAN2LQ9H0V9 348 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 PCIF1Q9H4Z3 704 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 FAM96AQ9H5X1 160 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 TMEM206Q9H813 350 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 MRPL47Q9HD33 250 aaKnown RBP7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 SCHIP1Q9P0W5 487 aaPredicted RBP7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 YBX2Q9Y2T7 364 aaKnown RBP7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 GIT1Q9Y2X7 761 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 GBF1Q92538 1859 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 TRIOBPQ9H2D6 2365 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 MICAL3Q7RTP6 2002 aa7.87□□□□□ -1.15
CNKSR3-202ENST00000433165 CEP290O15078 2479 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 GRXCR1A8MXD5 290 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 PI4K2BG5E9Z4 385 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 K7EPI3 171 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 CYB561D2O14569 222 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 RFPL1O75677 317 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 IFNB1P01574 187 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 RB1P06400 928 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 P4HBP07237 508 aaKnown RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 MAPTP10636 758 aaKnown RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 ATF7P17544 494 aaPredicted RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 PAX3P23760 479 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 GJC1P36383 396 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 PBX2P40425 430 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 NSFP46459 744 aaKnown RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 SLC5A3P53794 718 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 ERVK-21P61565 698 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 PRKCEQ02156 737 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 MAMLD1Q13495 774 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 MBTPS1Q14703 1052 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 GRIN2CQ14957 1233 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 PDK1Q15118 436 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 PCBP1Q15365 356 aaKnown RBP eCLIP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 KRT39Q6A163 491 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 NANOGNBQ7Z5D8 188 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 CARM1Q86X55 608 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 IGDCC3Q8IVU1 814 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 LILRA2Q8N149 483 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 ARL10Q8N8L6 244 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 DDHD1Q8NEL9 900 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 HM13Q8TCT9 377 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 SP7Q8TDD2 431 aaPredicted RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 PPP1R13LQ8WUF5 828 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 KBTBD7Q8WVZ9 684 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 CPA5Q8WXQ8 436 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 DLG3Q92796 817 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 EME1Q96AY2 570 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 VWCEQ96DN2 955 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 VCPIP1Q96JH7 1222 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 CBWD1Q9BRT8 395 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 GCOM2Q9BZD3 368 aaPredicted RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 DNAJC28Q9NX36 388 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 HSPBP1Q9NZL4 362 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 VPS28Q9UK41 221 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 LRFN2Q9ULH4 789 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 ARHGAP26Q9UNA1 814 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 TEX264Q9Y6I9 313 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 TRIP12Q14669 1992 aaPredicted RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 RALGAPA2Q2PPJ7 1873 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 TCRBV7S3A2A0A539 114 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 TISP43B9A030 160 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 CHMP2AO43633 222 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 CLASP2O75122 1294 aaKnown RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 KRT37O76014 449 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 C22orf31O95567 290 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 OXSR1O95747 527 aaPredicted RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 CHRNA1P02708 482 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 KRT1P04264 644 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 WEE2P0C1S8 567 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 ZNF26P17031 533 aaPredicted RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 ELK3P41970 407 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 QARSP47897 775 aaKnown RBP7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 NDST2P52849 883 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 RABGGTBP53611 331 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 C21orf59P57076 290 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 GPNMBQ14956 572 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 KCTD21Q4G0X4 260 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 ATP13A4Q4VNC1 1196 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 DCAF6Q58WW2 860 aa7.86□□□□□ -1.15
CNKSR3-202ENST00000433165 TFDP3Q5H9I0 405 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms