RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 H0Y626 953 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 M0QYT0 321 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 ATMINO43313 823 aaPredicted RBP17.45■□□□□ 0.38
UBE3D-204ENST00000430071 IGLV3-19P01714 112 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 ATP5BP06576 529 aaKnown RBP17.45■□□□□ 0.38
UBE3D-204ENST00000430071 SERPINF2P08697 491 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 VAV1P15498 845 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 NOS2P35228 1153 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 PLEKHG6Q3KR16 790 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 CCDC122Q5T0U0 273 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 ARTNQ5T4W7 220 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 CXorf57Q6NSI4 855 aaKnown RBP17.45■□□□□ 0.38
UBE3D-204ENST00000430071 C3orf20Q8ND61 904 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 RNF34Q969K3 372 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 CNTNAP3BQ96NU0 1288 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 CNTNAP3Q9BZ76 1288 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 SIK2Q9H0K1 926 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 DEF6Q9H4E7 631 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 C6orf106Q9H6K1 298 aaPredicted RBP17.45■□□□□ 0.38
UBE3D-204ENST00000430071 SPTLC3Q9NUV7 552 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 VANGL2Q9ULK5 521 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 HS3ST4Q9Y661 456 aa17.45■□□□□ 0.38
UBE3D-204ENST00000430071 SPEGQ15772 3267 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 TYW5A2RUC4 315 aaKnown RBP17.44■□□□□ 0.38
UBE3D-204ENST00000430071 F5H5T6 163 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 AKR1B10O60218 316 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 PAGE1O75459 146 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 ACADMP11310 421 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 PDGFRAP16234 1089 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 CCR1P32246 355 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 FLT3P36888 993 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 MATKP42679 507 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 NOVA1P51513 510 aaKnown RBP17.44■□□□□ 0.38
UBE3D-204ENST00000430071 AUHQ13825 339 aaKnown RBP17.44■□□□□ 0.38
UBE3D-204ENST00000430071 PPP1R15BQ5SWA1 713 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 SH3PXD2AQ5TCZ1 1133 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 DCAF12L1Q5VU92 463 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 TMEM139Q8IV31 216 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 EMC1Q8N766 993 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 JOSD2Q8TAC2 188 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 ALG14Q96F25 216 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 TBCBQ99426 244 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 KIAA1522Q9P206 1035 aaPredicted RBP17.44■□□□□ 0.38
UBE3D-204ENST00000430071 SERGEFQ9UGK8 458 aa17.44■□□□□ 0.38
UBE3D-204ENST00000430071 METTL12A8MUP2 240 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 CNTN5O94779 1100 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 C7P10643 843 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 ABCB4P21439 1286 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 SULT1E1P49888 294 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 BNC1Q01954 994 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 HNRNPA1L2Q32P51 320 aaKnown RBP17.43■□□□□ 0.38
UBE3D-204ENST00000430071 C9orf64Q5T6V5 341 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 DAB2IPQ5VWQ8 1189 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 PLEKHA7Q6IQ23 1121 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 DNAJC24Q6P3W2 148 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 ZCCHC9Q8N567 271 aaKnown RBP17.43■□□□□ 0.38
UBE3D-204ENST00000430071 DEFB124Q8NES8 71 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 DNASE2BQ8WZ79 361 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 NT5C3BQ969T7 300 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 ZNF653Q96CK0 615 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 MIR1-1HGQ9H1L0 117 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.43■□□□□ 0.38
UBE3D-204ENST00000430071 SUN2Q9UH99 717 aa17.43■□□□□ 0.38
UBE3D-204ENST00000430071 EIF2B4Q9UI10 523 aaKnown RBP17.43■□□□□ 0.38
UBE3D-204ENST00000430071 SOWAHDA6NJG2 315 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 SIGLEC16A6NMB1 481 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 MEI4A8MW99 385 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 TOP3BO95985 862 aaKnown RBP17.42■□□□□ 0.38
UBE3D-204ENST00000430071 ASLP04424 464 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 KRT3P12035 628 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 RFC1P35251 1148 aaPredicted RBP17.42■□□□□ 0.38
UBE3D-204ENST00000430071 HOXD12P35452 270 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 CXCR3P49682 368 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 ECT2LQ008S8 904 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 MAMLD1Q13495 774 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 E2F5Q15329 346 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 ALFQ53S48 1182 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 ARCQ7LC44 396 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 TMTC1Q8IUR5 882 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 ZNF683Q8IZ20 524 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 MINDY1Q8N5J2 469 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 C1orf216Q8TAB5 229 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 CEP76Q8TAP6 659 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 RPRD1AQ96P16 312 aaPredicted RBP17.42■□□□□ 0.38
UBE3D-204ENST00000430071 FAM129BQ96TA1 746 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 SELENOOQ9BVL4 669 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 PACSIN1Q9BY11 444 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 TKTL2Q9H0I9 626 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 THAP2Q9H0W7 228 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 RSPH9Q9H1X1 276 aaPredicted RBP17.42■□□□□ 0.38
UBE3D-204ENST00000430071 CNOT8Q9UFF9 292 aaKnown RBP17.42■□□□□ 0.38
UBE3D-204ENST00000430071 SLC12A6Q9UHW9 1150 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 GOLGA4Q13439 2230 aaKnown RBP17.42■□□□□ 0.38
UBE3D-204ENST00000430071 ARID1BQ8NFD5 2236 aaPredicted RBP17.42■□□□□ 0.38
UBE3D-204ENST00000430071 USP24Q9UPU5 2620 aa17.42■□□□□ 0.38
UBE3D-204ENST00000430071 C2CD4BA6NLJ0 364 aa17.41■□□□□ 0.38
UBE3D-204ENST00000430071 GOLGA6L6A8MZA4 724 aa17.41■□□□□ 0.38
UBE3D-204ENST00000430071 ARHGAP33O14559 1287 aa17.41■□□□□ 0.38
UBE3D-204ENST00000430071 MYBL1P10243 752 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms