RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 NR2E1Q9Y466 385 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 SZT2Q5T011 3432 aa11.71□□□□□ -0.53
CECR3-201ENST00000428828 DOCK6Q96HP0 2047 aa11.71□□□□□ -0.54
CECR3-201ENST00000428828 F8VP50 259 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 PRRG1O14668 218 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 TGM5O43548 720 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 TTC4O95801 387 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 TMEM253P0C7T8 217 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 CREB1P16220 341 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 GPD2P43304 727 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 HDAC4P56524 1084 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 WDR4P57081 412 aaKnown RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 TCEAL1Q15170 157 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 DDR2Q16832 855 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 LONRF1Q17RB8 773 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 DHRS4L2Q6PKH6 230 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 NLRP9Q7RTR0 991 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 PDSS2Q86YH6 399 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 WDTC1Q8N5D0 677 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 C12orf50Q8NA57 414 aaPredicted RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 ZNF461Q8TAF7 563 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 SPPL2BQ8TCT7 592 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 RFFLQ8WZ73 363 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 BTBD9Q96Q07 612 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 C11orf70Q9BRQ4 267 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 RBM38Q9H0Z9 239 aaKnown RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 TTYH1Q9H313 450 aaPredicted RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 NDE1Q9NXR1 346 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 TJP2Q9UDY2 1190 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 IRAK3Q9Y616 596 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 C2orf16Q68DN1 1984 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 PRRC2BQ5JSZ5 2229 aaKnown RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 SH3PXD2BA1X283 911 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 SEC24AO95486 1093 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 UNGP13051 313 aaPredicted RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 LCP1P13796 627 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 UQCRBP14927 111 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 ABCB4P21439 1286 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 GRIA2P42262 883 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 RAB33AQ14088 237 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 STAT4Q14765 748 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 PKDCCQ504Y2 493 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 CYP4A22Q5TCH4 519 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 DCAF12L1Q5VU92 463 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 FYB2Q5VWT5 728 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 PMF1Q6P1K2 205 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 LLGL2Q6P1M3 1020 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 RHBDF2Q6PJF5 856 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 OLFML1Q6UWY5 402 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 TRIM72Q6ZMU5 477 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 TDRPQ86YL5 185 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 ZMIZ2Q8NF64 920 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 CCDC77Q9BR77 488 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 USP29Q9HBJ7 922 aa11.7□□□□□ -0.54
CECR3-201ENST00000428828 METTL5Q9NRN9 209 aaKnown RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 KIAA1522Q9P206 1035 aaPredicted RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 AFF4Q9UHB7 1163 aaKnown RBP11.7□□□□□ -0.54
CECR3-201ENST00000428828 DENND4CQ5VZ89 1909 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 XPO1O14980 1071 aaKnown RBP11.69□□□□□ -0.54
CECR3-201ENST00000428828 BUD23O43709 281 aaKnown RBP11.69□□□□□ -0.54
CECR3-201ENST00000428828 SERPINB7O75635 380 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 ABLIM3O94929 683 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 LSM8O95777 96 aaKnown RBP11.69□□□□□ -0.54
CECR3-201ENST00000428828 GLUD1P00367 558 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 ABHD2P08910 425 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 ATF2P15336 505 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 ITIH2P19823 946 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 NRIP1P48552 1158 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 CHN2P52757 468 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 CENPCQ03188 943 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 CALCOCO2Q13137 446 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 RASA2Q15283 850 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 PTPROQ16827 1216 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 CCDC153Q494R4 210 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 PTPN20Q4JDL3 420 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 C6orf163Q5TEZ5 329 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 TPGS2Q68CL5 300 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 ACAD10Q6JQN1 1059 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 TMEM53Q6P2H8 277 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 GPRIN1Q7Z2K8 1008 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 PIGZQ86VD9 579 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 GPR65Q8IYL9 337 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 PRELID2Q8N945 189 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 C2orf15Q8WU43 125 aaKnown RBP11.69□□□□□ -0.54
CECR3-201ENST00000428828 ABTB1Q969K4 478 aaPredicted RBP11.69□□□□□ -0.54
CECR3-201ENST00000428828 FUBP3Q96I24 572 aaKnown RBP eCLIP11.69□□□□□ -0.54
CECR3-201ENST00000428828 CPXM1Q96SM3 734 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 LMAN2LQ9H0V9 348 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 LHX5Q9H2C1 402 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 PPCSQ9HAB8 311 aa11.69□□□□□ -0.54
CECR3-201ENST00000428828 SSU72Q9NP77 194 aaKnown RBP11.69□□□□□ -0.54
CECR3-201ENST00000428828 E5RJQ4 531 aa11.68□□□□□ -0.54
CECR3-201ENST00000428828 OPHN1O60890 802 aa11.68□□□□□ -0.54
CECR3-201ENST00000428828 CLASP2O75122 1294 aaKnown RBP11.68□□□□□ -0.54
CECR3-201ENST00000428828 HAUS5O94927 633 aa11.68□□□□□ -0.54
CECR3-201ENST00000428828 FTLP02792 175 aaPredicted RBP11.68□□□□□ -0.54
CECR3-201ENST00000428828 HAPLN1P10915 354 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms