RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 AGR3Q8TD06 166 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 C17orf80Q9BSJ5 609 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 CORO1CQ9ULV4 474 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ADGRA3Q8IWK6 1321 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 SLC38A8A6NNN8 435 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 SPECC1L-ADORA2AF8WAN1 911 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ENO1P06733 434 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 COL6A1P12109 1028 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 JAM2P57087 298 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ARMCX6Q7L4S7 300 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 TBC1D19Q8N5T2 526 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 CCNYL1Q8N7R7 359 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 OR6K2Q8NGY2 324 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 CXorf40AQ8TE69 158 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 SH3RF2Q8TEC5 729 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 NDRG1Q92597 394 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 PTPRN2Q92932 1015 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 IRF7Q92985 503 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 FBXL18Q96ME1 805 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 OLFM3Q96PB7 478 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 GTPBP2Q9BX10 602 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 BCO2Q9BYV7 579 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 NSUN3Q9H649 340 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 WRAP73Q9P2S5 460 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 DERAQ9Y315 318 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ATXN2Q99700 1313 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 MYH7P12883 1935 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 E2F8A0AVK6 867 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 PSTPIP1O43586 416 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ANXA9O76027 345 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ZWINTO95229 277 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 CASP2P42575 452 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 DRG2P55039 364 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ZNF268Q14587 947 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 C15orf59Q2T9L4 293 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 FASTKD1Q53R41 847 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 NLRP9Q7RTR0 991 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 CPNE8Q86YQ8 564 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 SLC26A7Q8TE54 656 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 LENG9Q96B70 501 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 TOX2Q96NM4 488 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ACBD6Q9BR61 282 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ADGRE3Q9BY15 652 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 RXFP1Q9HBX9 757 aa10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ZC3H7BQ9UGR2 993 aaKnown RBP10.86□□□□□ -0.67
TCOF1-204ENST00000427724 ADGRA2Q96PE1 1338 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 SRRM3A6NNA2 597 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 CFLARO15519 480 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 TIE1P35590 1138 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 POLR2LP62875 67 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 ROR2Q01974 943 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 ATP13A4Q4VNC1 1196 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 TIGD7Q6NT04 549 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 TTC27Q6P3X3 843 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 RFWD3Q6PCD5 774 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 WDR75Q8IWA0 830 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 FAM71AQ8IYT1 594 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 RIBC1Q8N443 379 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 ACTL9Q8TC94 416 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 CENPTQ96BT3 561 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 PCED1BQ96HM7 432 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 ZNF333Q96JL9 665 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 SPACA7Q96KW9 195 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 DUSP16Q9BY84 665 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 B3GNT5Q9BYG0 378 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 FOXP3Q9BZS1 431 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 C10orf88Q9H8K7 445 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 SLC39A10Q9ULF5 831 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 NUP188Q5SRE5 1749 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 N4BP2Q86UW6 1770 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 AHCYL1O43865 530 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 KDM1AO60341 852 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 RFPL2O75678 378 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 GJB5O95377 273 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 CFHP08603 1231 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 SERPINA4P29622 427 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 MMP13P45452 471 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 SNRPD1P62314 119 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 AP2B1P63010 937 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 OTUD4Q01804 1114 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 PFKPQ01813 784 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 PDAP1Q13442 181 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 LBRQ14739 615 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 ACBD5Q5T8D3 534 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 TPGS2Q68CL5 300 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 NAPEPLDQ6IQ20 393 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 TRMT11Q7Z4G4 463 aaKnown RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 ZNF483Q8TF39 744 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-204ENST00000427724 NUF2Q9BZD4 464 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 DNPEPQ9ULA0 475 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 SHOC2Q9UQ13 582 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 CCDC22O60826 627 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 RGS20O76081 388 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 CHRNA1P02708 482 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 SOD2P04179 222 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 RB1P06400 928 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 TYK2P29597 1187 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 RENBPP51606 427 aa10.85□□□□□ -0.67
TCOF1-204ENST00000427724 BTKQ06187 659 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms