RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 RNF40O75150 1001 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 SHBGP04278 402 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 ARL4CP56559 192 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 COG7P83436 770 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 CBX2Q14781 532 aaPredicted RBP18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 KYNUQ16719 465 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 FNBP1LQ5T0N5 605 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 RAP1GAP2Q684P5 730 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 NADSYN1Q6IA69 706 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 FBXL22Q6P050 247 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 LRRC31Q6UY01 552 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 CCDC149Q6ZUS6 474 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 EXOC4Q96A65 974 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 ARL8AQ96BM9 186 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 PLD4Q96BZ4 506 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 CELF6Q96J87 481 aaKnown RBP18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 PKNOX2Q96KN3 472 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 TMEM109Q9BVC6 243 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 FRMD8Q9BZ67 464 aaPredicted RBP18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 ZYG11BQ9C0D3 744 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 NDFIP2Q9NV92 336 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 TMEM248Q9NWD8 314 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 CLUHO75153 1309 aa18.39■□□□□ 0.53
AC055811.2-201ENST00000427497 C2orf78A6NCI8 922 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 PRR33A8MZF0 331 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 TPSB2P20231 275 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 PTPN3P26045 913 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 FDFT1P37268 417 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 IRAK1P51617 712 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 CBX1P83916 185 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 TPSAB1Q15661 275 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 C5orf22Q49AR2 442 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 FAXCQ5TGI0 409 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 PPP1R21Q6ZMI0 780 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 ZNF567Q8N184 647 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 UMODL1-AS1Q8N2C9 162 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 GOLGA6L1Q8N7Z2 621 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 KREMEN2Q8NCW0 462 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 MCUQ8NE86 351 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 ZSCAN18Q8TBC5 510 aaPredicted RBP18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 AZIN2Q96A70 460 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 SLC39A8Q9C0K1 460 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 NACA2Q9H009 215 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 RNF38Q9H0F5 515 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 TMBIM4Q9HC24 238 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 ZNF212Q9UDV6 495 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 DENND4CQ5VZ89 1909 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 MTCL1Q9Y4B5 1905 aaKnown RBP18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 KCNK1O00180 336 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 ACSL3O95573 720 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 C8AP07357 584 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 CCNCP24863 283 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 PDIA2Q13087 525 aaKnown RBP18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 FASTKD3Q14CZ7 662 aaKnown RBP18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 MSS51Q4VC12 460 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 PABPC1LQ4VXU2 614 aaKnown RBP18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 TTMPQ5BVD1 217 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 LRRC49Q8IUZ0 686 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 CCDC13Q8IYE1 715 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 PDIK1LQ8N165 341 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 DEPDC1BQ8WUY9 529 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 IGSF8Q969P0 613 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 C9orf72Q96LT7 481 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 TTC25Q96NG3 672 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 VAT1Q99536 393 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 KLF16Q9BXK1 252 aaPredicted RBP18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 LRRC3Q9BY71 257 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 NOL6Q9H6R4 1146 aaKnown RBP18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 LRRC4CQ9HCJ2 640 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 DONSONQ9NYP3 566 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 IGSF9Q9P2J2 1179 aa18.38■□□□□ 0.53
AC055811.2-201ENST00000427497 SHROOM3Q8TF72 1996 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 NYNRINQ9P2P1 1898 aaKnown RBP18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 ACSL4O60488 711 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 STC2O76061 302 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 OLFM2O95897 454 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 GLUD1P00367 558 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 LRG1P02750 347 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 ABHD2P08910 425 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 TACR2P21452 398 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 HARS2P49590 506 aaKnown RBP18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 IFFO1Q0D2I5 559 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 PARP6Q2NL67 630 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 ALFQ53S48 1182 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 TMC8Q8IU68 726 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 SEPT10Q9P0V9 454 aa18.37■□□□□ 0.53
AC055811.2-201ENST00000427497 MAFKO60675 156 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 CNTN5O94779 1100 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 C1RP00736 705 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 APRTP07741 180 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 MYZAPP0CAP1 466 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 CLCN4P51793 760 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 NDST2P52849 883 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 CDK16Q00536 496 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 FAM133BQ5BKY9 247 aaKnown RBP18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 CES5AQ6NT32 575 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 ZBED8Q8IZ13 594 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 SLC22A17Q8WUG5 538 aa18.36■□□□□ 0.53
AC055811.2-201ENST00000427497 ZFRQ96KR1 1074 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms