RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ARCQ7LC44 396 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 PROSER1Q86XN7 944 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 SERPINB11Q96P15 392 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 UXTQ9UBK9 157 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 CKLFQ9UBR5 152 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 FCHO1O14526 889 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 DGKAP23743 735 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 HECTD3Q5T447 861 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 R3HCC1LQ7Z5L2 792 aaKnown RBP14.68□□□□□ -0.06
PTPN13-203ENST00000427191 SFRP1Q8N474 314 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 PGM2Q96G03 612 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 ISCA1Q9BUE6 129 aa14.68□□□□□ -0.06
PTPN13-203ENST00000427191 CEP152O94986 1710 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 ZBTB14O43829 449 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CCNT2O60583 730 aaKnown RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 URODP06132 367 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CKBP12277 381 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 TNNI3P19429 210 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 SPIDRQ14159 915 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 GALNT3Q14435 633 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 PLK4O00444 970 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CBWD3Q5JTY5 395 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CBWD5Q5RIA9 395 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 NT5DC3Q86UY8 548 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 RDH11Q8TC12 318 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 DNAJC1Q96KC8 554 aaKnown RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CNTNAP5Q8WYK1 1306 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 NAIF1Q69YI7 327 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 TRPV1Q8NER1 839 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 FGF10O15520 208 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 IGKV5-2P06315 115 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 POTEHQ6S545 545 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 METTL6Q8TCB7 284 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CLUHO75153 1309 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 H3BNX3 289 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 ZMYND11Q15326 602 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 TCHHL1Q5QJ38 904 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 RASSF6Q6ZTQ3 369 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 ACOT12Q8WYK0 555 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CD101Q93033 1021 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 SLC9A8Q9Y2E8 581 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 SQORQ9Y6N5 450 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 INO80Q9ULG1 1556 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 ICAM1P05362 532 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CKMP06732 381 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 UMPSP11172 480 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 RPL14P50914 215 aaKnown RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 SGCGQ13326 291 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 ZC2HC1CQ53FD0 456 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CARNMT1Q8N4J0 409 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 PPP1R16AQ96I34 528 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 FAM126AQ9BYI3 521 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CACNA1FO60840 1977 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 IGSF6O95976 241 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CYP2C18P33260 490 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 CAMK1Q14012 370 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 NR1D2Q14995 579 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 COLGALT1Q8NBJ5 622 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 NT5MQ9NPB1 228 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 NAALADL1Q9UQQ1 740 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 KIF20BQ96Q89 1820 aa14.67□□□□□ -0.06
PTPN13-203ENST00000427191 URADA6NGE7 173 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 APOC1P02654 83 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 CHRNGP07510 517 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 EMC1Q8N766 993 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 ACMSDQ8TDX5 336 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 TMEM176AQ96HP8 235 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 SSR3Q9UNL2 185 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 TULP4Q9NRJ4 1543 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 AP3D1O14617 1153 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 MAGEC1O60732 1142 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 PACS1Q6VY07 963 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 DDX18Q9NVP1 670 aaKnown RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 L1RE1Q9UN81 338 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 WBP11Q9Y2W2 641 aaKnown RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 RAMP2O60895 175 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 NME5P56597 212 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 ST3GAL1Q11201 340 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 TMC3Q7Z5M5 1100 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 REXO1L1PQ8IX06 675 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 LENG9Q96B70 501 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 DCLK3Q9C098 648 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 GNPTGQ9UJJ9 305 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 TAF1CQ15572 869 aaPredicted RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 AKAP14Q86UN6 197 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 ZCCHC9Q8N567 271 aaKnown RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 SMARCD1Q96GM5 515 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 RNPEPL1Q9HAU8 725 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 PLA2R1Q13018 1463 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 SNAPC5O75971 98 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 THP07101 528 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 RPL5P46777 297 aaKnown RBP14.66□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF248Q8NDW4 579 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 TBL1YQ9BQ87 522 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 DCUN1D5Q9BTE7 237 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 PNPLA6Q8IY17 1366 aa14.66□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF609O15014 1411 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms