RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CYP2U1Q7Z449 544 aa22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 METTL3Q86U44 580 aaKnown RBP22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 FAM72BQ86X60 149 aa22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 TBC1D31Q96DN5 1066 aa22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 DNAJC7Q99615 494 aa22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 TRIM5Q9C035 493 aa22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 MRPL47Q9HD33 250 aaKnown RBP22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 USP36Q9P275 1121 aaKnown RBP22.92■■□□□ 1.26
PTCHD3P2-201ENST00000424937 A0A0D9SEW6 157 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 EDDM13A0A1B0GTR0 161 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 AP5Z1O43299 807 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 TGM1P22735 817 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 EIF4A3P38919 411 aaKnown RBP22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ZNF776Q68DI1 518 aaPredicted RBP22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ALKBH5Q6P6C2 394 aaKnown RBP22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 PYROXD2Q8N2H3 581 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 DEFB119Q8N690 84 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 OR8K1Q8NGG5 319 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 PSMB7Q99436 277 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 C2orf49Q9BVC5 232 aaPredicted RBP22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 THAP2Q9H0W7 228 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ITM2CQ9NQX7 267 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ZNF212Q9UDV6 495 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 FZD10Q9ULW2 581 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 NEU3Q9UQ49 428 aa22.91■■□□□ 1.26
PTCHD3P2-201ENST00000424937 BCLAF3A2AJT9 711 aaKnown RBP22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 SNAP91O60641 907 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 MFAP3LO75121 409 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 NDUFS2O75306 463 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 CD6P30203 668 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 PTGER3P43115 390 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 TPMTP51580 245 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 AIF1P55008 147 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 RPS14P62263 151 aaKnown RBP22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 KRT83P78385 493 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ARID5BQ14865 1188 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 CSRP2Q16527 193 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 CCDC122Q5T0U0 273 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 DCAF4L2Q8NA75 395 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 OR7D4Q8NG98 312 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 FNIP1Q8TF40 1166 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 SMOC1Q9H4F8 434 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ABHD10Q9NUJ1 306 aa22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ZNHIT6Q9NWK9 470 aaKnown RBP22.9■■□□□ 1.26
PTCHD3P2-201ENST00000424937 ILVBLA1L0T0 632 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 TARSL2A2RTX5 802 aaKnown RBP22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 RNF8O76064 485 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 DNTTP04053 509 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 RHOQP17081 205 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 TSR1Q2NL82 804 aaKnown RBP22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 C9orf64Q5T6V5 341 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 LYSMD4Q5XG99 296 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ZNF783Q6ZMS7 281 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 PRR23CQ6ZRP0 262 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 FAM124AQ86V42 546 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 TOE1Q96GM8 510 aaKnown RBP22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 RBSNQ9H1K0 784 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 RSPH9Q9H1X1 276 aaPredicted RBP22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 DEF6Q9H4E7 631 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 GPATCH2LQ9NWQ4 482 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 DNAI1Q9UI46 699 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 VPS51Q9UID3 782 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 AP4E1Q9UPM8 1137 aa22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.89■■□□□ 1.25
PTCHD3P2-201ENST00000424937 CREB3O43889 395 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 RNASEH1O60930 286 aaKnown RBP22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 VAV1P15498 845 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 L1CAMP32004 1257 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ADKP55263 362 aaKnown RBP22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 GNA12Q03113 381 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 GFPT1Q06210 699 aaPredicted RBP22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 TTC31Q49AM3 519 aaPredicted RBP22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ACCSLQ4AC99 568 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 SPDYCQ5MJ68 293 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 PLA2G2CQ5R387 149 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 NLRP14Q86W24 1093 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 PIGKQ92643 395 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 PTPRN2Q92932 1015 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 EPAS1Q99814 870 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 SPON2Q9BUD6 331 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ATP13A1Q9HD20 1204 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 VPS45Q9NRW7 570 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 NDFIP2Q9NV92 336 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 TMEM248Q9NWD8 314 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 PCSK1NQ9UHG2 260 aa22.88■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ATXN2Q99700 1313 aaKnown RBP22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ADAMTS9Q9P2N4 1935 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 IGLV3-19P01714 112 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 GLDCP23378 1020 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 EPHB2P29323 1055 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 OXTRP30559 389 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 MAPKAPK2P49137 400 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 VASPP50552 380 aaPredicted RBP22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 LMNB2Q03252 620 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ZBTB16Q05516 673 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 SF3A2Q15428 464 aaKnown RBP22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 CNGA4Q8IV77 575 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 STK40Q8N2I9 435 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 SH2D3CQ8N5H7 860 aa22.87■■□□□ 1.25
PTCHD3P2-201ENST00000424937 ARFGAP1Q8N6T3 406 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms