RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SLC5A3P53794 718 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 PER3P56645 1201 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CDC16Q13042 620 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 GBX1Q14549 363 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 UBXN2BQ14CS0 331 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 SNCBQ16143 134 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CNGA2Q16280 664 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CYP2A13Q16696 494 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 HSP90AA5PQ58FG0 334 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 FBXO48Q5FWF7 155 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 TCTE1Q5JU00 501 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 KCNT1Q5JUK3 1230 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 GRTP1Q5TC63 336 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 AFMIDQ63HM1 303 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CLEC2AQ6UVW9 174 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 OLFM4Q6UX06 510 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CCDC121Q6ZUS5 278 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CCDC149Q6ZUS6 474 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 RAB11FIP2Q7L804 512 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 GALNT7Q86SF2 657 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 TADA2BQ86TJ2 420 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CLRN3Q8NCR9 226 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 REPS2Q8NFH8 660 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 RFWD2Q8NHY2 731 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 IFI44Q8TCB0 444 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 CENPIQ92674 756 aaPredicted RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 CASP10Q92851 521 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 C11orf24Q96F05 449 aaPredicted RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 VPS39Q96JC1 886 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 ZC3H10Q96K80 434 aaKnown RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 SECISBP2Q96T21 854 aaKnown RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 PNKPQ96T60 521 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 DDX50Q9BQ39 737 aaKnown RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 BCL7BQ9BQE9 202 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 AIFM2Q9BRQ8 373 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 LLPHQ9BRT6 129 aaKnown RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 CRB3Q9BUF7 120 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 DDX23Q9BUQ8 820 aaKnown RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 ADI1Q9BV57 179 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 SLC26A6Q9BXS9 759 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 DENND2DQ9H6A0 471 aaPredicted RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 CAAP1Q9H8G2 361 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 C12orf10Q9HB07 376 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 PDE11AQ9HCR9 933 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 FARSBQ9NSD9 589 aaKnown RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 STK32BQ9NY57 414 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 EXTL2Q9UBQ6 330 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 TRHDEQ9UKU6 1024 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 C19orf53Q9UNZ5 99 aaPredicted RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 EXOC6BQ9Y2D4 811 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 ZFP37Q9Y6Q3 630 aaPredicted RBP3.01□□□□□ -1.93
PMS1-209ENST00000424059 TTC41PQ6P2S7 1318 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 PNPLA7Q6ZV29 1317 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 WDR19Q8NEZ3 1342 aa3.01□□□□□ -1.93
PMS1-209ENST00000424059 ERICH2A1L162 156 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CCDC78A2IDD5 438 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TRIM43BA6NCK2 446 aa3□□□□□ -1.93
PMS1-209ENST00000424059 GOLGA6L9A6NEM1 432 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ACOD1A6NK06 481 aa3□□□□□ -1.93
PMS1-209ENST00000424059 B4E171 279 aa3□□□□□ -1.93
PMS1-209ENST00000424059 K7EPI3 171 aa3□□□□□ -1.93
PMS1-209ENST00000424059 AP3D1O14617 1153 aa3□□□□□ -1.93
PMS1-209ENST00000424059 IKBKBO14920 756 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CHUKO15111 745 aa3□□□□□ -1.93
PMS1-209ENST00000424059 PEX1O43933 1283 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TSPAN3O60637 253 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ZC3H11AO75152 810 aaKnown RBP eCLIP3□□□□□ -1.93
PMS1-209ENST00000424059 TBX18O95935 607 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ABCB1P08183 1280 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 CCDC166P0CW27 439 aa3□□□□□ -1.93
PMS1-209ENST00000424059 PDHBP11177 359 aa3□□□□□ -1.93
PMS1-209ENST00000424059 ACTN1P12814 892 aa3□□□□□ -1.93
PMS1-209ENST00000424059 HSD3B1P14060 373 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CTRB1P17538 263 aa3□□□□□ -1.93
PMS1-209ENST00000424059 DDX5P17844 614 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 ARF4P18085 180 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 POLR2EP19388 210 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 WT1P19544 449 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 NFKBIAP25963 317 aa3□□□□□ -1.93
PMS1-209ENST00000424059 HOXA11P31270 313 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 PPARGP37231 505 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 PLA2G5P39877 138 aa3□□□□□ -1.93
PMS1-209ENST00000424059 MLH1P40692 756 aa3□□□□□ -1.93
PMS1-209ENST00000424059 OR1G1P47890 313 aa3□□□□□ -1.93
PMS1-209ENST00000424059 NPTX2P47972 431 aa3□□□□□ -1.93
PMS1-209ENST00000424059 HNMTP50135 292 aa3□□□□□ -1.93
PMS1-209ENST00000424059 THOP1P52888 689 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CLNS1AP54105 237 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 YBEYP58557 167 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 CSNK2BP67870 215 aa3□□□□□ -1.93
PMS1-209ENST00000424059 KRT85P78386 507 aa3□□□□□ -1.93
PMS1-209ENST00000424059 PLOD1Q02809 727 aaPredicted RBP3□□□□□ -1.93
PMS1-209ENST00000424059 RNASELQ05823 741 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 EXOSC9Q06265 439 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 MGAT2Q10469 447 aa3□□□□□ -1.93
PMS1-209ENST00000424059 TRPC3Q13507 836 aa3□□□□□ -1.93
PMS1-209ENST00000424059 CUL1Q13616 776 aa3□□□□□ -1.93
PMS1-209ENST00000424059 DHX34Q14147 1143 aaKnown RBP3□□□□□ -1.93
PMS1-209ENST00000424059 STK38Q15208 465 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms