RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 GOLGA6L6A8MZA4 724 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 PROB1E7EW31 1015 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 FGF10O15520 208 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-205ENST00000423941 CREB3O43889 395 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 FNTBP49356 437 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 TAS2R40P59535 323 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 NHLH1Q02575 133 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 GNA12Q03113 381 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 HADHQ16836 314 aaKnown RBP18.93■□□□□ 0.62
HDAC6-205ENST00000423941 KCNT1Q5JUK3 1230 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 SERPINA13PQ6UXR4 307 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 POLNQ7Z5Q5 900 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 TSTD1Q8NFU3 115 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 ARHGEF2Q92974 986 aaKnown RBP18.93■□□□□ 0.62
HDAC6-205ENST00000423941 MAGEH1Q9H213 219 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 CATSPERBQ9H7T0 1116 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 SLCO3A1Q9UIG8 710 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 SALL4Q9UJQ4 1053 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 TFR2Q9UP52 801 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 HS3ST2Q9Y278 367 aa18.93■□□□□ 0.62
HDAC6-205ENST00000423941 ATP9BO43861 1147 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 GABRG2P18507 467 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 IL4RP24394 825 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 CNR2P34972 360 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 ETFBP38117 255 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 MRE11P49959 708 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 YBEYP58557 167 aaPredicted RBP18.92■□□□□ 0.62
HDAC6-205ENST00000423941 TPI1P60174 286 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 DPYSQ14117 519 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 MESDQ14696 234 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 HNRNPA1L2Q32P51 320 aaKnown RBP18.92■□□□□ 0.62
HDAC6-205ENST00000423941 RFX8Q6ZV50 586 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 METTL3Q86U44 580 aaKnown RBP18.92■□□□□ 0.62
HDAC6-205ENST00000423941 MDGA1Q8NFP4 955 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 OR7D4Q8NG98 312 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 FRS2Q8WU20 508 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 RPL10LQ96L21 214 aaKnown RBP18.92■□□□□ 0.62
HDAC6-205ENST00000423941 LACRTQ9GZZ8 138 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 ZWILCHQ9H900 591 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 PCDH18Q9HCL0 1135 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 DONSONQ9NYP3 566 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 SUN2Q9UH99 717 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 VPS51Q9UID3 782 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 VPS28Q9UK41 221 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 RAD54BQ9Y620 910 aa18.92■□□□□ 0.62
HDAC6-205ENST00000423941 NYNRINQ9P2P1 1898 aaKnown RBP18.92■□□□□ 0.62
HDAC6-205ENST00000423941 EEF2KO00418 725 aaKnown RBP18.91■□□□□ 0.62
HDAC6-205ENST00000423941 AXIN1O15169 862 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 HRO43593 1189 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 GOT1P17174 413 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 SLC1A1P43005 524 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 VAV2P52735 878 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 COPAP53621 1224 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 KRT83P78385 493 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 SLC20A2Q08357 652 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 SMTNL2Q2TAL5 461 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 ATP13A4Q4VNC1 1196 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 FNDC3BQ53EP0 1204 aaKnown RBP18.91■□□□□ 0.62
HDAC6-205ENST00000423941 LRRC38Q5VT99 294 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 AFMIDQ63HM1 303 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 LRRC8AQ8IWT6 810 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 ACRBPQ8NEB7 543 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 CALR3Q96L12 384 aaKnown RBP18.91■□□□□ 0.62
HDAC6-205ENST00000423941 MRGPRX1Q96LB2 322 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 C2orf49Q9BVC5 232 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-205ENST00000423941 MUC3BQ9H195 1237 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 SEMA4AQ9H3S1 761 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 LRRC19Q9H756 370 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 PRSS16Q9NQE7 514 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 RCOR3Q9P2K3 495 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-205ENST00000423941 DNAI1Q9UI46 699 aa18.91■□□□□ 0.62
HDAC6-205ENST00000423941 TCRBV21S2A2A0A5A6 115 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 TARSL2A2RTX5 802 aaKnown RBP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 BUB1BO60566 1050 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 SNAP91O60641 907 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 ALDH1A2O94788 518 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 IPO7O95373 1038 aaKnown RBP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 CD160O95971 181 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 HLA-EP13747 358 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 ERCC2P18074 760 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 ACVRL1P37023 503 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 PXNP49023 591 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 STK19P49842 368 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 NDST2P52849 883 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 ST8SIA6P61647 398 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 C9orf64Q5T6V5 341 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 ANO7Q6IWH7 933 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 SH2D3CQ8N5H7 860 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 ATOH1Q92858 354 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 PTPRN2Q92932 1015 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 MKRN2Q9H000 416 aaKnown RBP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 FBRSQ9HAH7 460 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.9■□□□□ 0.62
HDAC6-205ENST00000423941 DUSP10Q9Y6W6 482 aa18.9■□□□□ 0.62
HDAC6-205ENST00000423941 TTC34A8MYJ7 566 aa18.89■□□□□ 0.61
HDAC6-205ENST00000423941 H3BRJ5 948 aa18.89■□□□□ 0.61
HDAC6-205ENST00000423941 DCLK1O15075 740 aa18.89■□□□□ 0.61
HDAC6-205ENST00000423941 RAMP2O60895 175 aa18.89■□□□□ 0.61
HDAC6-205ENST00000423941 MT-CO1P00395 513 aa18.89■□□□□ 0.61
HDAC6-205ENST00000423941 EPHX1P07099 455 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms