RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 EIF4HQ15056 248 aaKnown RBP17.42■□□□□ 0.38
COL7A1-202ENST00000422991 TFDP3Q5H9I0 405 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 AFMIDQ63HM1 303 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 MBLAC2Q68D91 279 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 NCBP2-AS2Q69YL0 99 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 SLC9A4Q6AI14 798 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 NUDT18Q6ZVK8 323 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 ARHGAP12Q8IWW6 846 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 APCDD1Q8J025 514 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 LZTR1Q8N653 840 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 PJA1Q8NG27 643 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 OR7D4Q8NG98 312 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 NELL2Q99435 816 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 PSMB7Q99436 277 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 MAGEH1Q9H213 219 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 LRRC19Q9H756 370 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 PRDM16Q9HAZ2 1276 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 MTF2Q9Y483 593 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-202ENST00000422991 JRKLQ9Y4A0 524 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 NUP205Q92621 2012 aa17.42■□□□□ 0.38
COL7A1-202ENST00000422991 RASA4BC9J798 803 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 RASA4O43374 803 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 MFSD11O43934 449 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 PDGFBP01127 241 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 PYGMP11217 842 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 CHRNB1P11230 501 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 SERPINB6P35237 376 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 ETFBP38117 255 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 NDST2P52849 883 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 YBEYP58557 167 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 ZNF211Q13398 564 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 POLD3Q15054 466 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 PAFAH1B3Q15102 231 aaKnown RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 PARP15Q460N3 678 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 CWF19L1Q69YN2 538 aaKnown RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 RFX6Q8HWS3 928 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 CCDC105Q8IYK2 499 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 PLD5Q8N7P1 536 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 DCAF4L2Q8NA75 395 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 ARHGEF2Q92974 986 aaKnown RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 TTC17Q96AE7 1141 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 CELF6Q96J87 481 aaKnown RBP17.41■□□□□ 0.38
COL7A1-202ENST00000422991 OSBPL6Q9BZF3 934 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 KCNH6Q9H252 994 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 MFSD1Q9H3U5 465 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 ELOVL2Q9NXB9 296 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 VPS28Q9UK41 221 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 STARD13Q9Y3M8 1113 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 ZNF318Q5VUA4 2279 aa17.41■□□□□ 0.38
COL7A1-202ENST00000422991 WDFY4Q6ZS81 3184 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 FAM170BA6NMN3 283 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 ENC1O14682 589 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 TIMM44O43615 452 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 KRT10P13645 584 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 POLR2EP19388 210 aaKnown RBP17.4■□□□□ 0.38
COL7A1-202ENST00000422991 ACVRL1P37023 503 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 NUMBP49757 651 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 GNG11P61952 73 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 FZD5Q13467 585 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 TFDP2Q14188 446 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 LRRC32Q14392 662 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 FBXO43Q4G163 708 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 DGKKQ5KSL6 1271 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 AADACL2Q6P093 401 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-202ENST00000422991 HMCESQ96FZ2 354 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 HERPUD2Q9BSE4 406 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 MAK16Q9BXY0 300 aaKnown RBP17.4■□□□□ 0.38
COL7A1-202ENST00000422991 ACE2Q9BYF1 805 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-202ENST00000422991 OSBPL8Q9BZF1 889 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 CIPCQ9C0C6 399 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 CARD9Q9H257 536 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 ATP13A1Q9HD20 1204 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 RBM12Q9NTZ6 932 aaKnown RBP17.4■□□□□ 0.38
COL7A1-202ENST00000422991 HCN2Q9UL51 889 aa17.4■□□□□ 0.38
COL7A1-202ENST00000422991 ANTXRLA6NF34 631 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 KCNK3O14649 394 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 APOL1O14791 398 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 ASLP04424 464 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 ATP1A1P05023 1023 aaKnown RBP17.39■□□□□ 0.37
COL7A1-202ENST00000422991 ZFXP17010 805 aaPredicted RBP17.39■□□□□ 0.37
COL7A1-202ENST00000422991 CETN2P41208 172 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 KIR2DL1P43626 348 aaPredicted RBP17.39■□□□□ 0.37
COL7A1-202ENST00000422991 SEC13P55735 322 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 GBE1Q04446 702 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 ADCY2Q08462 1091 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 SERINC3Q13530 473 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 LLGL1Q15334 1064 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 KAZNQ674X7 775 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 TP53INP2Q8IXH6 220 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 SYNPOQ8N3V7 929 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 NETO2Q8NC67 525 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 FLCNQ8NFG4 579 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 SORCS1Q8WY21 1168 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 WDR24Q96S15 920 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 SPON2Q9BUD6 331 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 C2orf49Q9BVC5 232 aaPredicted RBP17.39■□□□□ 0.37
COL7A1-202ENST00000422991 SLC39A8Q9C0K1 460 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 VPS51Q9UID3 782 aa17.39■□□□□ 0.37
COL7A1-202ENST00000422991 EFR3BQ9Y2G0 817 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms