RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 C10orf142B7Z368 130 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3LB9A6J9 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 ERBB2P04626 1255 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3HP0C7X1 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 DRD3P35462 400 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 KRT9P35527 623 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 VASPP50552 380 aaPredicted RBP17.79■□□□□ 0.44
PTCD1-202ENST00000419981 UBE2HP62256 183 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 AUHQ13825 339 aaKnown RBP17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TPD52L1Q16890 204 aaPredicted RBP17.79■□□□□ 0.44
PTCD1-202ENST00000419981 ACCSLQ4AC99 568 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 CCDC157Q569K6 752 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3GQ6DHY5 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3CQ6IPX1 549 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.79■□□□□ 0.44
PTCD1-202ENST00000419981 SLC26A9Q7LBE3 791 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 GATAD2AQ86YP4 633 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 IRF2BP1Q8IU81 584 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 TBC1D3Q8IZP1 549 aaPredicted RBP17.79■□□□□ 0.44
PTCD1-202ENST00000419981 MDM1Q8TC05 714 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 FRS2Q8WU20 508 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 SERAC1Q96JX3 654 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 SYNCQ9H7C4 482 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 SIX2Q9NPC8 291 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 AJAP1Q9UKB5 411 aaPredicted RBP17.79■□□□□ 0.44
PTCD1-202ENST00000419981 HS3ST4Q9Y661 456 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 SHROOM3Q8TF72 1996 aa17.79■□□□□ 0.44
PTCD1-202ENST00000419981 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.78■□□□□ 0.44
PTCD1-202ENST00000419981 A0A1W2PR77 199 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 M0QYT0 321 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 YKT6O15498 198 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 NOS2P35228 1153 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 GGCXP38435 758 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 IRAK1P51617 712 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 PPP2CBP62714 309 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 PPP2CAP67775 309 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 SLC6A3Q01959 620 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 ZNF177Q13360 481 aaPredicted RBP17.78■□□□□ 0.44
PTCD1-202ENST00000419981 PTPN20Q4JDL3 420 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 PRAMEF14Q5SWL7 426 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 FAM46CQ5VWP2 391 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 ZNF397Q8NF99 534 aaPredicted RBP17.78■□□□□ 0.44
PTCD1-202ENST00000419981 FEM1AQ9BSK4 669 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 KDM4CQ9H3R0 1056 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 GDF3Q9NR23 364 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 DNAJC12Q9UKB3 198 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 KNTC1P50748 2209 aa17.78■□□□□ 0.44
PTCD1-202ENST00000419981 C1QTNF3-AMACRE9PGA6 284 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 WNT9AO14904 365 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 SLC7A4O43246 635 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 LATO43561 262 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 ATP9BO43861 1147 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 PAGE1O75459 146 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 CLDN11O75508 207 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 ITGAVP06756 1048 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 CLCN1P35523 988 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 METAP1P53582 386 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 MAN2A1Q16706 1144 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 NAPEPLDQ6IQ20 393 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 PRPF39Q86UA1 669 aaKnown RBP17.77■□□□□ 0.44
PTCD1-202ENST00000419981 SLC47A2Q86VL8 602 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 MLKLQ8NB16 471 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 OR52K2Q8NGK3 314 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 FAM131CQ96AQ9 280 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 ALG14Q96F25 216 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 SIK2Q9H0K1 926 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 PLCB1Q9NQ66 1216 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 RRN3Q9NYV6 651 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 VPS28Q9UK41 221 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 CACNA1GO43497 2377 aa17.77■□□□□ 0.44
PTCD1-202ENST00000419981 FOXN3O00409 490 aaPredicted RBP17.76■□□□□ 0.43
PTCD1-202ENST00000419981 PLK4O00444 970 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 ALOX15BO15296 676 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 PLRG1O43660 514 aaKnown RBP17.76■□□□□ 0.43
PTCD1-202ENST00000419981 RTN2O75298 545 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 PNMA6AP0CW24 399 aaPredicted RBP17.76■□□□□ 0.43
PTCD1-202ENST00000419981 ZNF18P17022 549 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 ARRB1P49407 418 aaPredicted RBP17.76■□□□□ 0.43
PTCD1-202ENST00000419981 CDH4P55283 916 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 NXPH1P58417 271 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 SHBQ15464 509 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 DLG2Q15700 870 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 SMAD1Q15797 465 aaKnown RBP17.76■□□□□ 0.43
PTCD1-202ENST00000419981 C5orf22Q49AR2 442 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 DHRS13Q6UX07 377 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 Q6ZVU0 165 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 MARCH9Q86YJ5 346 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 ZDHHC17Q8IUH5 632 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 FAM114A1Q8IWE2 563 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 OXR1Q8N573 874 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 SH2D3CQ8N5H7 860 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 PIP4K2CQ8TBX8 421 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 MUC3BQ9H195 1237 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 PIGVQ9NUD9 493 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 SARDHQ9UL12 918 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 STAP1Q9ULZ2 295 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 GPSM3Q9Y4H4 160 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 OR51B4Q9Y5P0 310 aa17.76■□□□□ 0.43
PTCD1-202ENST00000419981 NBEAQ8NFP9 2946 aa17.75■□□□□ 0.43
PTCD1-202ENST00000419981 APC2O95996 2303 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms