RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 MON1BQ7L1V2 547 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 STRADAQ7RTN6 431 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 SETD3Q86TU7 594 aaPredicted RBP16.92■□□□□ 0.3
LINC00404-201ENST00000418660 STK40Q8N2I9 435 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 FRS2Q8WU20 508 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 BAP1Q92560 729 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 SELENOOQ9BVL4 669 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 GTPBP2Q9BX10 602 aaKnown RBP16.92■□□□□ 0.3
LINC00404-201ENST00000418660 MUC3BQ9H195 1237 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 MIR1-1HGQ9H1L0 117 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 MPP6Q9NZW5 540 aa16.92■□□□□ 0.3
LINC00404-201ENST00000418660 EIF2B4Q9UI10 523 aaKnown RBP16.92■□□□□ 0.3
LINC00404-201ENST00000418660 A0A1B0GTH6 734 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 SIGLEC16A6NMB1 481 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 MID1O15344 667 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 SRGAP2O75044 1071 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 GJB6O95452 261 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 CSRP1P21291 193 aaKnown RBP16.91■□□□□ 0.3
LINC00404-201ENST00000418660 C5AR1P21730 350 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 RFC1P35251 1148 aaPredicted RBP16.91■□□□□ 0.3
LINC00404-201ENST00000418660 ADRA1BP35368 520 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 ELAVL3Q14576 367 aaKnown RBP16.91■□□□□ 0.3
LINC00404-201ENST00000418660 CDO1Q16878 200 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 ACCSLQ4AC99 568 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 C6orf118Q5T5N4 469 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 SH3PXD2AQ5TCZ1 1133 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
LINC00404-201ENST00000418660 C3orf20Q8ND61 904 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 GANCQ8TET4 914 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 CENPIQ92674 756 aaPredicted RBP16.91■□□□□ 0.3
LINC00404-201ENST00000418660 NAP1L5Q96NT1 182 aaPredicted RBP16.91■□□□□ 0.3
LINC00404-201ENST00000418660 ZYG11BQ9C0D3 744 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 ADAMTS1Q9UHI8 967 aa16.91■□□□□ 0.3
LINC00404-201ENST00000418660 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.91■□□□□ 0.3
LINC00404-201ENST00000418660 SYCE3A1L190 88 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 BCAT2O15382 392 aaPredicted RBP16.9■□□□□ 0.3
LINC00404-201ENST00000418660 ADH1BP00325 375 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 VAV1P15498 845 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 PTMSP20962 102 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 GPD1P21695 349 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 OR1E1P30953 314 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 NRG1Q02297 640 aaPredicted RBP16.9■□□□□ 0.3
LINC00404-201ENST00000418660 DLG2Q15700 870 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 RAB6CQ53S08 254 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 ACAD10Q6JQN1 1059 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 WDR59Q6PJI9 974 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 TFAP2DQ7Z6R9 452 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 HDDC3Q8N4P3 179 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 SH2D3CQ8N5H7 860 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 MINDY1Q8N5J2 469 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 C1orf216Q8TAB5 229 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 BIRC7Q96CA5 298 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 PSMB7Q99436 277 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 OMDQ99983 421 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 SYT11Q9BT88 431 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 C2orf49Q9BVC5 232 aaPredicted RBP16.9■□□□□ 0.3
LINC00404-201ENST00000418660 ZDHHC5Q9C0B5 715 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 RAB6CQ9H0N0 254 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 NEUROG2Q9H2A3 272 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 PPARGC1AQ9UBK2 798 aaKnown RBP16.9■□□□□ 0.3
LINC00404-201ENST00000418660 SERGEFQ9UGK8 458 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 FZD4Q9ULV1 537 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 HS3ST2Q9Y278 367 aa16.9■□□□□ 0.3
LINC00404-201ENST00000418660 PCDH15Q96QU1 1955 aa16.89■□□□□ 0.3
LINC00404-201ENST00000418660 A0A1W2PP55 124 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 TCRBV5S1A1TA0A578 114 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 ILVBLA1L0T0 632 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 LRRC53A6NM62 1247 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 UPK3BL1B0FP48 263 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 UPK3BL2E5RIL1 263 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 OPHN1O60890 802 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 RNASEH2AO75792 299 aaKnown RBP16.89■□□□□ 0.29
LINC00404-201ENST00000418660 FSBPO95073 299 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 SERPINC1P01008 464 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 IL1BP01584 269 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 GOT1P17174 413 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 TNFAIP3P21580 790 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 PSMD8P48556 350 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 NOVA1P51513 510 aaKnown RBP16.89■□□□□ 0.29
LINC00404-201ENST00000418660 GALCP54803 685 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 HDAC4P56524 1084 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 TPM4P67936 248 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 SEMA3BQ13214 749 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 NR1I3Q14994 352 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 N4BP2L1Q5TBK1 243 aaPredicted RBP16.89■□□□□ 0.29
LINC00404-201ENST00000418660 PSAPL1Q6NUJ1 521 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 PPP1R2P3Q6NXS1 205 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 DNAJC24Q6P3W2 148 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 ZNF783Q6ZMS7 281 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 DSG4Q86SJ6 1040 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 DCAF4L2Q8NA75 395 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 FAM172AQ8WUF8 416 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 OR8D1Q8WZ84 308 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 SNX19Q92543 992 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 EDEM3Q9BZQ6 932 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 OSBPL2Q9H1P3 480 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 OSGEPQ9NPF4 335 aa16.89■□□□□ 0.29
LINC00404-201ENST00000418660 DNAAF2Q9NVR5 837 aaKnown RBP16.89■□□□□ 0.29
LINC00404-201ENST00000418660 AIPL1Q9NZN9 384 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms