RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 PRICKLE3O43900 615 aaPredicted RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 IPO13O94829 963 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 KIF20AO95235 890 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 CAVIN2O95810 425 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 AHSGP02765 367 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 KITP10721 976 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 CYP2C9P11712 490 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 MYF5P13349 255 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 CAPN2P17655 700 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 SCP2P22307 547 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 GLRA2P23416 452 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 NMT1P30419 496 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 PPP1R2P41236 205 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 PRCPP42785 496 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 CLCN3P51790 818 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 PEX3P56589 373 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 LAMTOR4Q0VGL1 99 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 DMP1Q13316 513 aaPredicted RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 DRP2Q13474 957 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 BIRC2Q13490 618 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 STIM1Q13586 685 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 ITGA7Q13683 1181 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 MXD4Q14582 209 aaPredicted RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 UBXN2BQ14CS0 331 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 ZNF720Q7Z2F6 126 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 LIMS2Q7Z4I7 341 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 MYOCDQ8IZQ8 938 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 ADSSL1Q8N142 457 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 GUF1Q8N442 669 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 KIAA0895Q8NCT3 520 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 PSPC1Q8WXF1 523 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 ZBTB10Q96DT7 871 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 SLC39A13Q96H72 371 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 FIZ1Q96SL8 496 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 MAP7D2Q96T17 732 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 STRA6Q9BX79 667 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 NAA15Q9BXJ9 866 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 NAT10Q9H0A0 1025 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 MRPL44Q9H9J2 332 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 SLAMF7Q9NQ25 335 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 STARD7Q9NQZ5 370 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 PIH1D1Q9NWS0 290 aaKnown RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 FAM30AQ9NZY2 134 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 CLCA2Q9UQC9 943 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 GDAQ9Y2T3 454 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 LOXHD1Q8IVV2 1947 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 CEP350Q5VT06 3117 aa6.34□□□□□ -1.4
NIFKP3-201ENST00000417799 SCN10AQ9Y5Y9 1956 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 LRRIQ4A6NIV6 560 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 K7ENM7 598 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 PSMA7O14818 248 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 EIF3DO15371 548 aaKnown RBP eCLIP6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 SLC43A1O75387 559 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 GCNT3O95395 438 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 SLC7A1P30825 629 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 ABCD1P33897 745 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 NAMPTP43490 491 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 CASP5P51878 434 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 GTF2BQ00403 316 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 POU5F1BQ06416 359 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 ALCAMQ13740 583 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 CAPSQ13938 189 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 TFDP1Q14186 410 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 PTGISQ16647 500 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 ZC2HC1CQ53FD0 456 aaPredicted RBP6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 TAF2Q6P1X5 1199 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 C11orf57Q6ZUT1 292 aaPredicted RBP6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 STXBP4Q6ZWJ1 553 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 HAUS6Q7Z4H7 955 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 POLNQ7Z5Q5 900 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 GAS2L3Q86XJ1 694 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 RHPN2Q8IUC4 686 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 KRT78Q8N1N4 520 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 NME8Q8N427 588 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 CELF5Q8N6W0 485 aaKnown RBP6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 RNF149Q8NC42 400 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 RNF169Q8NCN4 708 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 TMEM161BQ8NDZ6 487 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 MDGA1Q8NFP4 955 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 PARD3BQ8TEW8 1205 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 SCFD1Q8WVM8 642 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 DNAJB3Q8WWF6 145 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 PMM1Q92871 262 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 APIPQ96GX9 242 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 DHTKD1Q96HY7 919 aaPredicted RBP6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 RPS6KC1Q96S38 1066 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 BPIFA3Q9BQP9 254 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 FGFBP2Q9BYJ0 223 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 FAM49AQ9H0Q0 323 aaPredicted RBP6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 ST6GALNAC4Q9H4F1 302 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 GSTO2Q9H4Y5 243 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 BRD9Q9H8M2 597 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 RSAD1Q9HA92 442 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 FBXO34Q9NWN3 711 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 JKAMPQ9P055 326 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 ZDHHC8Q9ULC8 765 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 PHTF1Q9UMS5 762 aa6.33□□□□□ -1.4
NIFKP3-201ENST00000417799 UBE4BO95155 1302 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 DENND3A2RUS2 1198 aa6.32□□□□□ -1.4
NIFKP3-201ENST00000417799 HAUS5O94927 633 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms