RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 CCNFP41002 786 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 NT5C2P49902 561 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 GATMP50440 423 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CLCN4P51793 760 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CLCN7P51798 805 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 MTTPP55157 894 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 YBEYP58557 167 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 POLR2GP62487 172 aaKnown RBP eCLIP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 RNF4P78317 190 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 IFI35P80217 286 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TAP2Q03519 686 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 C17orf67Q0P5P2 114 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 BFSP1Q12934 665 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 COL9A2Q14055 689 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 HNRNPDQ14103 355 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 PON2Q15165 354 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ANGPT1Q15389 498 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CNGA2Q16280 664 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 FAM110CQ1W6H9 321 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 AAK1Q2M2I8 961 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 C2orf76Q3KRA6 126 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TTMPQ5BVD1 217 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 NOL9Q5SY16 702 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CLVS2Q5SYC1 327 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ZNF362Q5T0B9 420 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 DEPDC1Q5TB30 811 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 THEMIS2Q5TEJ8 643 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 WDR93Q6P2C0 686 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TRIM65Q6PJ69 517 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 SLC2A7Q6PXP3 512 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 PI16Q6UXB8 463 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 DBX2Q6ZNG2 339 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 C15orf52Q6ZUT6 534 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TMTC3Q6ZXV5 915 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ZNF365Q70YC5 407 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 MARK2Q7KZI7 788 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CYFIP1Q7L576 1253 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 UBE3BQ7Z3V4 1068 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 PRRT2Q7Z6L0 340 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 DSG4Q86SJ6 1040 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 MTDHQ86UE4 582 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TMTC1Q8IUR5 882 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 SPACA3Q8IXA5 215 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 FAM178BQ8IXR5 827 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 THNSL1Q8IYQ7 743 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TAGAPQ8N103 731 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 AHI1Q8N157 1196 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ANKRD13CQ8N6S4 541 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ZNF527Q8NB42 609 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 PPFIBP2Q8ND30 876 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 LPCAT1Q8NF37 534 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ZNF397Q8NF99 534 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 OR8K1Q8NGG5 319 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 OR6S1Q8NH40 331 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CLHC1Q8NHS4 586 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 IFI44Q8TCB0 444 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 PDCD6IPQ8WUM4 868 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ASZ1Q8WWH4 475 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 COA7Q96BR5 231 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 C19orf60Q96EN9 201 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 SGF29Q96ES7 293 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 HSPBAP1Q96EW2 488 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 MED30Q96HR3 178 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CNOT6LQ96LI5 555 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CCDC74BQ96LY2 380 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CCDC42Q96M95 316 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CAMK1GQ96NX5 476 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 DACH2Q96NX9 599 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TREX2Q9BQ50 279 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 C9orf16Q9BUW7 83 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TTLL2Q9BWV7 592 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 APOL6Q9BWW8 343 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 NFKBIZQ9BYH8 718 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 KRTAP17-1Q9BYP8 105 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ZSCAN16Q9H4T2 348 aaPredicted RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 LRRC19Q9H756 370 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ATP13A3Q9H7F0 1226 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 FAM204AQ9H8W3 233 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 NEK6Q9HC98 313 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 FBRSL1Q9HCM7 1045 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 EIF2B3Q9NR50 452 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ARHGEF38Q9NXL2 777 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TAS2R3Q9NYW6 316 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 EXTL2Q9UBQ6 330 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CD300AQ9UGN4 299 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 SEC63Q9UGP8 760 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 AFF4Q9UHB7 1163 aaKnown RBP4.06□□□□□ -1.76
LINC01048-201ENST00000414480 IL19Q9UHD0 177 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 MAD2L2Q9UI95 211 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TSPYL4Q9UJ04 414 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 ANAPC5Q9UJX4 755 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 FBXL21Q9UKT6 434 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TMCO1Q9UM00 188 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 CAPN11Q9UMQ6 739 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 SLC8A2Q9UPR5 921 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 DNM3Q9UQ16 869 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 NAALAD2Q9Y3Q0 740 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 TELO2Q9Y4R8 837 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 PCDHB4Q9Y5E5 795 aa4.06□□□□□ -1.76
LINC01048-201ENST00000414480 RPAP1Q9BWH6 1393 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms