RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 GNA12Q03113 381 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 DPYSQ14117 519 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 BOLA3Q53S33 107 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 ANO7Q6IWH7 933 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 SCYL2Q6P3W7 929 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 POLNQ7Z5Q5 900 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 TFAP2DQ7Z6R9 452 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 UMODL1-AS1Q8N2C9 162 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 PYROXD2Q8N2H3 581 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 FRS2Q8WU20 508 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 CYB5D2Q8WUJ1 264 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 TSC1Q92574 1164 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 MRGPRX1Q96LB2 322 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 MAGEH1Q9H213 219 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 NOL6Q9H6R4 1146 aaKnown RBP14.36□□□□□ -0.11
GYPC-203ENST00000409836 OSGEPQ9NPF4 335 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 DONSONQ9NYP3 566 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 USP36Q9P275 1121 aaKnown RBP14.36□□□□□ -0.11
GYPC-203ENST00000409836 CTTNBP2NLQ9P2B4 639 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 VPS51Q9UID3 782 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 R4GN57 208 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 CEP192Q8TEP8 1941 aa14.36□□□□□ -0.11
GYPC-203ENST00000409836 FRYLO94915 3013 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 A0A0D9SEW6 157 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 BTNL10A8MVZ5 291 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 ZNF487B1APH4 448 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 WASH3PC4AMC7 463 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 SRGAP2O75044 1071 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 EPHB2P29323 1055 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 CTSOP43234 321 aaPredicted RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 GSDMDP57764 484 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 YBEYP58557 167 aaPredicted RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 ZBTB16Q05516 673 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 CA9Q16790 459 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 PARP15Q460N3 678 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 FNDC3BQ53EP0 1204 aaKnown RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 RNF219Q5W0B1 726 aaPredicted RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 AFMIDQ63HM1 303 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 SLC35G2Q8TBE7 412 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 ZC3H10Q96K80 434 aaKnown RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 MAGEB5Q9BZ81 275 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 MKRN2Q9H000 416 aaKnown RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 RSPH9Q9H1X1 276 aaPredicted RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 CATSPERBQ9H7T0 1116 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
GYPC-203ENST00000409836 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 FAM86C1Q9NVL1 165 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 VPS28Q9UK41 221 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 ABCA7Q8IZY2 2146 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 CACNA1EQ15878 2313 aa14.35□□□□□ -0.11
GYPC-203ENST00000409836 EDDM13A0A1B0GTR0 161 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 PRR23AA6NEV1 266 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 SOWAHDA6NJG2 315 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 ALOX15BO15296 676 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 HRO43593 1189 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 RPP40O75818 363 aaKnown RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 EPHX1P07099 455 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 ARSEP51690 589 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 TPI1P60174 286 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 ST8SIA6P61647 398 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 KRT83P78385 493 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 MAP7D1Q3KQU3 841 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 LRRC38Q5VT99 294 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 DAB2IPQ5VWQ8 1189 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 RFX8Q6ZV50 586 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 OR2T3Q8NH03 318 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 ARHGEF2Q92974 986 aaKnown RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 NKD2Q969F2 451 aaPredicted RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 FAM131CQ96AQ9 280 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 BTBD6Q96KE9 485 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 CALR3Q96L12 384 aaKnown RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 KCTD15Q96SI1 283 aaPredicted RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 PHOX2BQ99453 314 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 KLC2Q9H0B6 622 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 MUC3BQ9H195 1237 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 DHX35Q9H5Z1 703 aaKnown RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 LRRC19Q9H756 370 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 PRSS16Q9NQE7 514 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 GPATCH2LQ9NWQ4 482 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 SUN2Q9UH99 717 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 SMG5Q9UPR3 1016 aaKnown RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 REXO2Q9Y3B8 237 aaKnown RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 RAD54BQ9Y620 910 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
GYPC-203ENST00000409836 THADAQ6YHU6 1953 aa14.34□□□□□ -0.11
GYPC-203ENST00000409836 ZSCAN5CA6NGD5 496 aaPredicted RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 C10orf142B7Z368 130 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 RAMP2O60895 175 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 ZNF217O75362 1048 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 LMNAP02545 664 aaKnown RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 RARAP10276 462 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 SRCP12931 536 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 WASP42768 502 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 STK19P49842 368 aaPredicted RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 SERPINH1P50454 418 aaKnown RBP14.33□□□□□ -0.12
GYPC-203ENST00000409836 NDST2P52849 883 aa14.33□□□□□ -0.12
GYPC-203ENST00000409836 GEMIN4P57678 1058 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms