RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNX13-202ENST00000409604 FAM111AQ96PZ2 611 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 C2orf49Q9BVC5 232 aaPredicted RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 ERI2A8K979 691 aaKnown RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 PITPNM1O00562 1244 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 DDX3YO15523 660 aaKnown RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 MTSS1O43312 755 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 AGTP01019 485 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 TACR2P21452 398 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 PPARGP37231 505 aaPredicted RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 HADHAP40939 763 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 CHRNA4P43681 627 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 OCRLQ01968 901 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 BOP1Q14137 746 aaKnown RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 SYTL3Q4VX76 610 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 SLC45A4Q5BKX6 768 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 CERCAMQ5T4B2 595 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 ATP6V1G3Q96LB4 118 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 RRN3Q9NYV6 651 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 NCANO14594 1321 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 TMEM120BA0PK00 339 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 KCNU1A8MYU2 1149 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 SNAP91O60641 907 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 CDH16O75309 829 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 CNTN5O94779 1100 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 PTPN2P17706 415 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 DSC2Q02487 901 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 ACOX1Q15067 660 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 TIGD7Q6NT04 549 aaPredicted RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 BBS12Q6ZW61 710 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 LRRC57Q8N9N7 239 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 EBF3Q9H4W6 596 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 PPARGC1AQ9UBK2 798 aaKnown RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 ACADMP11310 421 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 TYMPP19971 482 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 PROZP22891 400 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 VIPR2P41587 438 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 IFI35P80217 286 aaPredicted RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 PLIN5Q00G26 463 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 MBTPS1Q14703 1052 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 MMEL1Q495T6 779 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 TP53INP2Q8IXH6 220 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 RGL4Q8IZJ4 473 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 AFAP1L2Q8N4X5 818 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 GLIS1Q8NBF1 620 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 PDZD8Q8NEN9 1154 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 DDX1Q92499 740 aaKnown RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 PCDH9Q9HC56 1237 aa11.63□□□□□ -0.55
SNX13-202ENST00000409604 AAR2Q9Y312 384 aaKnown RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.63□□□□□ -0.55
SNX13-202ENST00000409604 TCP11X1B4DZS4 312 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 SRP72O76094 671 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 GUCA1CO95843 209 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 EPCAMP16422 314 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CDKN2BP42772 138 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 GJA8P48165 433 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 PPP2R2AP63151 447 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 PFKPQ01813 784 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 GPR17Q13304 367 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CTBP1Q13363 440 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 C6orf163Q5TEZ5 329 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CYB5D2Q8WUJ1 264 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 SCG3Q8WXD2 468 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 PABPC3Q9H361 631 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 ABCB8Q9NUT2 735 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 DNALI1O14645 258 aaPredicted RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 INPP4BO15327 924 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 SHBGP04278 402 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CHN1P15882 459 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CDC25CP30307 473 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 LIG3P49916 1009 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CNGA3Q16281 694 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 ANGPTL8Q6UXH0 198 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 GLT6D1Q7Z4J2 308 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 DDIASQ8IXT1 998 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 HMCESQ96FZ2 354 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 BTN2A3PQ96KV6 586 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 NDNQ99608 321 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 GDAP2Q9NXN4 497 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 INSL5Q9Y5Q6 135 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 HMGB1P1B2RPK0 211 aaPredicted RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 FAM72CH0Y354 149 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 SOD2P04179 222 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 HSPA8P11142 646 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 MAT2AP31153 395 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 GKP32189 559 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 GRIA1P42261 906 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 DNAJC3Q13217 504 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 CSHL1Q14406 222 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 STARD3Q14849 445 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 FASTKD3Q14CZ7 662 aaKnown RBP11.62□□□□□ -0.55
SNX13-202ENST00000409604 NOMO1Q15155 1222 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 PLEKHG4Q58EX7 1191 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 FAM72AQ5TYM5 149 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 ARHGAP17Q68EM7 881 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 FAM72DQ6L9T8 149 aa11.62□□□□□ -0.55
SNX13-202ENST00000409604 FAM72BQ86X60 149 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms