RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ASPHD1Q5U4P2 390 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 FAM171A1Q5VUB5 890 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 KDELC2Q7Z4H8 507 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 GPSM1Q86YR5 675 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 CSGALNACT1Q8TDX6 532 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 RPS6KC1Q96S38 1066 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 PAGR1Q9BTK6 254 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.52□□□□□ -1.69
PMS1-203ENST00000409593 FRMD8Q9BZ67 464 aaPredicted RBP4.52□□□□□ -1.69
PMS1-203ENST00000409593 ABHD16BQ9H3Z7 469 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 MRPL44Q9H9J2 332 aaKnown RBP4.52□□□□□ -1.69
PMS1-203ENST00000409593 SYN3O14994 580 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 MDM4O15151 490 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 ALPLP05186 524 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 HOXB9P17482 250 aaPredicted RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 TYK2P29597 1187 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 RBM5P52756 815 aaKnown RBP eCLIP4.51□□□□□ -1.69
PMS1-203ENST00000409593 FOXO1Q12778 655 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 BIRC2Q13490 618 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 PRKG1Q13976 671 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 PDCD2Q16342 344 aaPredicted RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 JMJD6Q6NYC1 403 aaPredicted RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 MTFR2Q6P444 385 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 C9orf47Q6ZRZ4 202 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 IGFN1Q86VF2 1251 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 SAMD14Q8IZD0 417 aaPredicted RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 PELI3Q8N2H9 469 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 SLC25A41Q8N5S1 370 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 DPP10Q8N608 796 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 FSIP1Q8NA03 581 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 CMASQ8NFW8 434 aaPredicted RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 NPAS1Q99742 590 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 DDX23Q9BUQ8 820 aaKnown RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 RBM38Q9H0Z9 239 aaKnown RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 ACAD9Q9H845 621 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 MAP6D1Q9H9H5 199 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 PNRC2Q9NPJ4 139 aaKnown RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 TMLHEQ9NVH6 421 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 TBC1D14Q9P2M4 693 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 SRP68Q9UHB9 627 aaKnown RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 hCG_1642624A0A1W2PR95 340 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 FAM90A20PA6NIJ5 464 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 E7EVH7 732 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 CCNT1O60563 726 aaKnown RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 IFNA2P01563 188 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 VEGFAP15692 232 aaPredicted RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 SLC16A2P36021 539 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 OR6Y1Q8NGX8 325 aa4.51□□□□□ -1.69
PMS1-203ENST00000409593 ACTR5Q9H9F9 607 aaPredicted RBP4.51□□□□□ -1.69
PMS1-203ENST00000409593 PROB1E7EW31 1015 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 TNFRSF13BO14836 293 aaPredicted RBP4.5□□□□□ -1.69
PMS1-203ENST00000409593 KCNAB3O43448 404 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 LDHAP00338 332 aaKnown RBP4.5□□□□□ -1.69
PMS1-203ENST00000409593 HOXB2P14652 356 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 ITGB6P18564 788 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 TMPRSS3P57727 454 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 RAPGEF1Q13905 1077 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 DCTN1Q14203 1278 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 C5orf22Q49AR2 442 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 RUNDC3AQ59EK9 446 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 AAGABQ6PD74 315 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 PARM1Q6UWI2 310 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 ZNF517Q6ZMY9 492 aaPredicted RBP4.5□□□□□ -1.69
PMS1-203ENST00000409593 ZDHHC17Q8IUH5 632 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 SCN4BQ8IWT1 228 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 FAM217AQ8IXS0 508 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 FAM185AQ8N0U4 392 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 PTGR2Q8N8N7 351 aaPredicted RBP4.5□□□□□ -1.69
PMS1-203ENST00000409593 LRRC57Q8N9N7 239 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 INPP5DQ92835 1189 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 PLEKHA2Q9HB19 425 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 Q9N2J8 555 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 SAYSD1Q9NPB0 183 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 RNF146Q9NTX7 359 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 KLQ9UEF7 1012 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 COMMD10Q9Y6G5 202 aa4.5□□□□□ -1.69
PMS1-203ENST00000409593 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 IKBKBO14920 756 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 PEX14O75381 377 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 CYP4B1P13584 511 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 ACP5P13686 325 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 CHN1P15882 459 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 CST5P28325 142 aaPredicted RBP4.49□□□□□ -1.69
PMS1-203ENST00000409593 CUL4BQ13620 913 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 POSTNQ15063 836 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 SMAD1Q15797 465 aaKnown RBP4.49□□□□□ -1.69
PMS1-203ENST00000409593 RASGRP2Q7LDG7 609 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 CTU1Q7Z7A3 348 aaKnown RBP4.49□□□□□ -1.69
PMS1-203ENST00000409593 GALNT15Q8N3T1 639 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 C7orf57Q8NEG2 295 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 C2CD4CQ8TF44 421 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 TRAPPC12Q8WVT3 735 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 CAMK1GQ96NX5 476 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 IFT27Q9BW83 186 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 ISCUQ9H1K1 167 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 HIPK3Q9H422 1215 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 SIRT3Q9NTG7 399 aaPredicted RBP4.49□□□□□ -1.69
PMS1-203ENST00000409593 RAP2CQ9Y3L5 183 aa4.49□□□□□ -1.69
PMS1-203ENST00000409593 INSL5Q9Y5Q6 135 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms