RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 DHX40Q8IX18 779 aaKnown RBP14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 ZNF366Q8N895 744 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 GANCQ8TET4 914 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 PTPRN2Q92932 1015 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 IGSF8Q969P0 613 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 ALG14Q96F25 216 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 PCMTD1Q96MG8 357 aaPredicted RBP14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 FAM129BQ96TA1 746 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 BPIFA3Q9BQP9 254 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 C2orf49Q9BVC5 232 aaPredicted RBP14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 SIK2Q9H0K1 926 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 MIR1-1HGQ9H1L0 117 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 EIF2B4Q9UI10 523 aaKnown RBP14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 IGLV3-10A0A075B6K4 115 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 C2orf72A6NCS6 295 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 TTC34A8MYJ7 566 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 SLC7A4O43246 635 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 GJB3O75712 270 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 ADCY5O95622 1261 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 MZF1P28698 734 aaPredicted RBP14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 NUDT1P36639 197 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 GRIA4P48058 902 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 GSCP56915 257 aaPredicted RBP14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 SLC20A2Q08357 652 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 SUZ12Q15022 739 aaKnown RBP14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 NAA35Q5VZE5 725 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 BIRC7Q96CA5 298 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 RPL10LQ96L21 214 aaKnown RBP14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 CCDC114Q96M63 670 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 TBCBQ99426 244 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 C6orf106Q9H6K1 298 aaPredicted RBP14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 PPARGC1AQ9UBK2 798 aaKnown RBP14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 VPS28Q9UK41 221 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 MYO6Q9UM54 1294 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 PCDHGB2Q9Y5G2 931 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 OR51B4Q9Y5P0 310 aa14.94□□□□□ -0.02
NIF3L1-205ENST00000409588 SPTBN2O15020 2390 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 MCF2LO15068 1137 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 CALB1P05937 261 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 UNGP13051 313 aaPredicted RBP14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 SDC4P31431 198 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 CTSOP43234 321 aaPredicted RBP14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 NSFP46459 744 aaKnown RBP14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 CCR5P51681 352 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 RACK1P63244 317 aaKnown RBP14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 FMO1Q01740 532 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 NRG1Q02297 640 aaPredicted RBP14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 GRIK2Q13002 908 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 KIAA0895LQ68EN5 471 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 STRADAQ7RTN6 431 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 MMAAQ8IVH4 418 aaKnown RBP14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 ZCCHC9Q8N567 271 aaKnown RBP14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 OR2T34Q8NGX1 318 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 FRS2Q8WU20 508 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 OR8D1Q8WZ84 308 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 MUC3BQ9H195 1237 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 NLRC4Q9NPP4 1024 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 HS3ST2Q9Y278 367 aa14.93□□□□□ -0.02
NIF3L1-205ENST00000409588 A0A1W2PPC4 97 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 ILVBLA1L0T0 632 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 GOLGA8SH3BPF8 625 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 MID1O15344 667 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 RNASEH2AO75792 299 aaKnown RBP14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 IL1BP01584 269 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 KRT3P12035 628 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 CD59P13987 128 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 CHRNB2P17787 502 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 OR1E1P30953 314 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 FLT3P36888 993 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 ETFBP38117 255 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 PTPN9P43378 593 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 GALCP54803 685 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 CENPCQ03188 943 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 TYRO3Q06418 890 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 ZNF252P-AS1Q0IIN9 211 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 NCAPHQ15003 741 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 ACCSLQ4AC99 568 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 FILIP1LQ4L180 1135 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 OTUD1Q5VV17 481 aaPredicted RBP14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 RETSATQ6NUM9 610 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 DBX2Q6ZNG2 339 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 C14orf80Q86SX3 495 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 PHF13Q86YI8 300 aaPredicted RBP14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 ZNF683Q8IZ20 524 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 SH2D3CQ8N5H7 860 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 DEFB124Q8NES8 71 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 CENPIQ92674 756 aaPredicted RBP14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 ZYG11BQ9C0D3 744 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 OSBPL2Q9H1P3 480 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 NEUROG2Q9H2A3 272 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 ADAM22Q9P0K1 906 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 PPM1HQ9ULR3 514 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 PCDHB9Q9Y5E1 797 aa14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 MUC22E2RYF6 1773 aaPredicted RBP14.92□□□□□ -0.02
NIF3L1-205ENST00000409588 CACNA1EQ15878 2313 aa14.91□□□□□ -0.02
NIF3L1-205ENST00000409588 ANKRD62A6NC57 917 aa14.91□□□□□ -0.02
NIF3L1-205ENST00000409588 E9PAM4 449 aa14.91□□□□□ -0.02
NIF3L1-205ENST00000409588 C1QTNF3-AMACRE9PGA6 284 aa14.91□□□□□ -0.02
NIF3L1-205ENST00000409588 FSBPO95073 299 aa14.91□□□□□ -0.02
NIF3L1-205ENST00000409588 RHOCP08134 193 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms