RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 C6orf106Q9H6K1 298 aaPredicted RBP13.21□□□□□ -0.29
SNORD88B-201ENST00000408454 ERVMER34-1Q9H9K5 563 aa13.21□□□□□ -0.29
SNORD88B-201ENST00000408454 ARHGEF38Q9NXL2 777 aa13.21□□□□□ -0.29
SNORD88B-201ENST00000408454 ABCA7Q8IZY2 2146 aa13.21□□□□□ -0.3
SNORD88B-201ENST00000408454 MYO18AQ92614 2054 aaKnown RBP13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 A0A1W2PP55 124 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 ILVBLA1L0T0 632 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 MCF2LO15068 1137 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 MID1O15344 667 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 TNFSF14O43557 240 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 SH3BP5O60239 455 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 GJB3O75712 270 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 ERBB2P04626 1255 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 CLCN1P35523 988 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 SGSHP51688 502 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 GALCP54803 685 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 RNASE9P60153 205 aaKnown RBP13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 TPM4P67936 248 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 CDR2Q01850 454 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 RAD51Q06609 339 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 POLD3Q15054 466 aaPredicted RBP13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 PTPN20Q4JDL3 420 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 NAPEPLDQ6IQ20 393 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 GJB7Q6PEY0 223 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 DCP2Q8IU60 420 aaKnown RBP13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 IRF2BP1Q8IU81 584 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 ZNF366Q8N895 744 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 MFSD2AQ8NA29 543 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 ERLEC1Q96DZ1 483 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 LRIG1Q96JA1 1093 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 LMLNQ96KR4 655 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 MRGPRX3Q96LB0 322 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 PPARGC1AQ9UBK2 798 aaKnown RBP13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 FTSJ1Q9UET6 329 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 PCOLCE2Q9UKZ9 415 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 HS3ST4Q9Y661 456 aa13.2□□□□□ -0.3
SNORD88B-201ENST00000408454 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 A0A1B0GVT2 93 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 FAM221BA6H8Z2 402 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 SMTNL1A8MU46 457 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 PRAMEF26H0Y7S4 382 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 GIPC1O14908 333 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 GRAP2O75791 330 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 ITGAVP06756 1048 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 FTH1P19P0C7X4 201 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 HTR7P34969 479 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 SOX5P35711 763 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 CSNK1EP49674 416 aaKnown RBP13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 ADPRHP54922 357 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 DLG2Q15700 870 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 FSCBQ5H9T9 825 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 MIIPQ5JXC2 388 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 NCEH1Q6PIU2 408 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 TRIM69Q86WT6 500 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 SH2D3CQ8N5H7 860 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 PCDH20Q8N6Y1 951 aaKnown RBP13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 TMIEQ8NEW7 156 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 WFDC5Q8TCV5 224 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 EPS8L1Q8TE68 723 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 NT5C3BQ969T7 300 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 SERAC1Q96JX3 654 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 ELF4Q99607 663 aaPredicted RBP13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 C1QTNF7Q9BXJ2 289 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 SIX2Q9NPC8 291 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 INTS6Q9UL03 887 aaKnown RBP13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 PCDHGA1Q9Y5H4 931 aa13.19□□□□□ -0.3
SNORD88B-201ENST00000408454 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 SPAARA0A1B0GVQ0 90 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 TTC34A8MYJ7 566 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 ALPPL2P10696 532 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 AKT2P31751 481 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 NRG1Q02297 640 aaPredicted RBP13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 ILKQ13418 452 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 KIF19Q2TAC6 998 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 CXorf57Q6NSI4 855 aaKnown RBP13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 RAB44Q7Z6P3 723 aaPredicted RBP13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 XYLT1Q86Y38 959 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 STK40Q8N2I9 435 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 WDTC1Q8N5D0 677 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 C1orf216Q8TAB5 229 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 PTPRN2Q92932 1015 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 RAB7BQ96AH8 199 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 MYO19Q96H55 970 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 RPL10LQ96L21 214 aaKnown RBP13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 SELENOOQ9BVL4 669 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 NEUROG2Q9H2A3 272 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 NCKIPSDQ9NZQ3 722 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 MYO6Q9UM54 1294 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 FHOD1Q9Y613 1164 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 SDK1Q7Z5N4 2213 aa13.18□□□□□ -0.3
SNORD88B-201ENST00000408454 DMXL1Q9Y485 3027 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms