RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MAGEC1O60732 1142 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 IL1BP01584 269 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 FERP16591 822 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 ZNF18P17022 549 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 PTMSP20962 102 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 MAOBP27338 520 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 MZF1P28698 734 aaPredicted RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 OR1E1P30953 314 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 SLC8A1P32418 973 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 PTPN9P43378 593 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 RECQLP46063 649 aaPredicted RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 PSMD8P48556 350 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 CCR5P51681 352 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 GSCP56915 257 aaPredicted RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 C21orf59P57076 290 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 GEMIN4P57678 1058 aaKnown RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 TPM4P67936 248 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 ACCSLQ4AC99 568 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 MMS22LQ6ZRQ5 1243 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 STRADAQ7RTN6 431 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 PIP4P1Q86T03 277 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 CIR1Q86X95 450 aaPredicted RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 APCDD1Q8J025 514 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 CPA5Q8WXQ8 436 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 IGSF8Q969P0 613 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 BIRC7Q96CA5 298 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 MYEOVQ96EZ4 313 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 RPL10LQ96L21 214 aaKnown RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 FEM1AQ9BSK4 669 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 SELENOOQ9BVL4 669 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 ACE2Q9BYF1 805 aaPredicted RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 ZYG11BQ9C0D3 744 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 C6orf106Q9H6K1 298 aaPredicted RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 GAREM1Q9H706 876 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 DYRK4Q9NR20 520 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 PPARGC1AQ9UBK2 798 aaKnown RBP9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 TMEM59LQ9UK28 342 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 MYO6Q9UM54 1294 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 HS3ST2Q9Y278 367 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 SIK3Q9Y2K2 1263 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 ASCC3Q8N3C0 2202 aaKnown RBP9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 LAMA1P25391 3075 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 IGLV3-10A0A075B6K4 115 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 A0A1W2PPC4 97 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 ILVBLA1L0T0 632 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 FAM47DPA6NHR8 397 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 DRGXA6NNA5 263 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 E9PAM4 449 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 MCF2LO15068 1137 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 GJB3O75712 270 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 ADCY5O95622 1261 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 PRNPP04156 253 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 KRT3P12035 628 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 FLT3P36888 993 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 CTSOP43234 321 aaPredicted RBP9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 MAPKAPK2P49137 400 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 CCT8P50990 548 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 AIF1P55008 147 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 SIM1P81133 766 aaPredicted RBP9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 FMO1Q01740 532 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 TYRO3Q06418 890 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 SLC20A2Q08357 652 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 FOXC1Q12948 553 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 OTUD1Q5VV17 481 aaPredicted RBP9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 NAXDQ8IW45 347 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 STK40Q8N2I9 435 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 OXR1Q8N573 874 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 SH2D3CQ8N5H7 860 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 AOPEPQ8N6M6 819 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 ATP11CQ8NB49 1132 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 C3orf20Q8ND61 904 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 PTPRN2Q92932 1015 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 PPP1R16AQ96I34 528 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 CDC6Q99741 560 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 C11orf70Q9BRQ4 267 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 TM9SF3Q9HD45 589 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 TM7SF3Q9NS93 570 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 SEPT11Q9NVA2 429 aaKnown RBP9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 DONSONQ9NYP3 566 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 ADAM22Q9P0K1 906 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 SLCO3A1Q9UIG8 710 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 DMTF1Q9Y222 760 aa9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 APOBEC2Q9Y235 224 aaKnown RBP9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 NYNRINQ9P2P1 1898 aaKnown RBP9.32□□□□□ -0.92
SNORD88A-201ENST00000408314 TMEM8BA6NDV4 472 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 VILLO15195 856 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 ENDOD1O94919 500 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 UNGP13051 313 aaPredicted RBP9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 CD59P13987 128 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 GRK6P43250 576 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 STK19P49842 368 aaPredicted RBP9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 GALCP54803 685 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 ADPRHP54922 357 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 ATP11AP98196 1134 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms