RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 KRT78Q8N1N4 520 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 TUT1Q9H6E5 874 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 ALOX15BO15296 676 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 TPH1P17752 444 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 NOS2P35228 1153 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 ALDH7A1P49419 539 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 PLK1P53350 603 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 OR7A2PQ8NGA2 310 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 DDX43Q9NXZ2 648 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 AK5Q9Y6K8 562 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 DCCP43146 1447 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 OPLAHO14841 1288 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 EDF1O60869 148 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 YBX3P16989 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNED1-205ENST00000405547 MAGEA10P43363 369 aaPredicted RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 PIK3CGP48736 1102 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 SLC25A3Q00325 362 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 SLC44A2Q8IWA5 706 aaPredicted RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 ROGDIQ9GZN7 287 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 RGS14O43566 566 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 TRUB2O95900 331 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 FGFR3P22607 806 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 GRIA3P42263 894 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 ITGA1P56199 1179 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 PWP1Q13610 501 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
SNED1-205ENST00000405547 FAM228AQ86W67 206 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 RDH11Q8TC12 318 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 SEMA6AQ9H2E6 1030 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 CLIC5Q9NZA1 410 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 LNPEPQ9UIQ6 1025 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 RIC1Q4ADV7 1423 aa13.57□□□□□ -0.24
SNED1-205ENST00000405547 CPSF4O95639 269 aaKnown RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 RPL22P35268 128 aaKnown RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 EFEMP1Q12805 493 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 TTC23Q5W5X9 447 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 BBS12Q6ZW61 710 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 TTC30AQ86WT1 665 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 TRPC4APQ8TEL6 797 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 KAT5Q92993 513 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 ZNF670Q9BS34 389 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 RERGLQ9H628 205 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 PIH1D1Q9NWS0 290 aaKnown RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 HDAC3O15379 428 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 IL12RB1P42701 662 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 TNK2Q07912 1038 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 QPCTQ16769 361 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 LIPMQ5VYY2 423 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 MRPL57Q9BQC6 102 aaKnown RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 PNPLA3Q9NST1 481 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 PADI4Q9UM07 663 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 INVSQ9Y283 1065 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 TNPO3Q9Y5L0 923 aaKnown RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 PABPC1P11940 636 aaKnown RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 TCF3P15923 654 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 YY1P25490 414 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 BROXQ5VW32 411 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 HEATR4Q86WZ0 1026 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 YAF2Q8IY57 180 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 RAET1EQ8TD07 263 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 RNF157Q96PX1 679 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 CBFA2T3O75081 653 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 MYL12AP19105 171 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 MAPK11Q15759 364 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 POPDC2Q9HBU9 364 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 GAKO14976 1311 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 PSMD10O75832 226 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 CHKAP35790 457 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 ZNF410Q86VK4 478 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 GPSM1Q86YR5 675 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 SYT15Q9BQS2 421 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 TIMMDC1Q9NPL8 285 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 AHSPQ9NZD4 102 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 UBA2Q9UBT2 640 aaPredicted RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 RSL24D1Q9UHA3 163 aaKnown RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 DYRK1BQ9Y463 629 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 MFN2O95140 757 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 RHOCP08134 193 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 LBPP18428 481 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 TUBP50607 506 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 SCNN1BP51168 640 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 STK40Q8N2I9 435 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 SPPL2AQ8TCT8 520 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 LENG1Q96BZ8 264 aaPredicted RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 IDI2Q9BXS1 227 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 DUSP12Q9UNI6 340 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 RAP2CQ9Y3L5 183 aa13.56□□□□□ -0.24
SNED1-205ENST00000405547 MTF2Q9Y483 593 aaPredicted RBP13.56□□□□□ -0.24
SNED1-205ENST00000405547 OR1E1P30953 314 aa13.55□□□□□ -0.24
SNED1-205ENST00000405547 GRIA4P48058 902 aa13.55□□□□□ -0.24
SNED1-205ENST00000405547 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
SNED1-205ENST00000405547 MAGEE2Q8TD90 523 aaPredicted RBP13.55□□□□□ -0.24
SNED1-205ENST00000405547 RNFT2Q96EX2 444 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms