RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KIF2AO00139 706 aaPredicted RBP34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 RASA4O43374 803 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 PRLRP16471 622 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 CD72P21854 359 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 SLC10A2Q12908 348 aaPredicted RBP34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 PON2Q15165 354 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 ZNF783Q6ZMS7 281 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 KIAA0907Q7Z7F0 614 aaPredicted RBP34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 SFTPA1Q8IWL2 248 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 ARHGEF2Q92974 986 aaKnown RBP34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 HAUS1Q96CS2 278 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 HMCESQ96FZ2 354 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 SPON2Q9BUD6 331 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 MAGEH1Q9H213 219 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 VPS28Q9UK41 221 aa34.11■■■■□ 3.05
CSNK1E-204ENST00000403904 KAT7O95251 611 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 TUBB4AP04350 444 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 YBEYP58557 167 aaPredicted RBP34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 SLC12A1Q13621 1099 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 PLEKHG6Q3KR16 790 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 FUT11Q495W5 492 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 CCDC181Q5TID7 509 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 ADAT2Q7Z6V5 191 aaKnown RBP34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 TERB1Q8NA31 727 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 DTLQ9NZJ0 730 aa34.1■■■■□ 3.05
CSNK1E-204ENST00000403904 NYNRINQ9P2P1 1898 aaKnown RBP34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 DFFAO00273 331 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 FGGP02679 453 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 PECAM1P16284 738 aaPredicted RBP34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 KLF1Q13351 362 aaPredicted RBP34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 PARP15Q460N3 678 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 PITRM1Q5JRX3 1037 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 TMEM215Q68D42 235 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 IL31Q6EBC2 164 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 ADIPOR2Q86V24 386 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 AHI1Q8N157 1196 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 FAM3CQ92520 227 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 MSANTD3Q96H12 275 aa34.09■■■■□ 3.05
CSNK1E-204ENST00000403904 KRBA1A5PL33 1030 aa34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 TBC1D3BA6NDS4 549 aa34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 TGM2P21980 687 aa34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 PAPOLAP51003 745 aaKnown RBP34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 PREPLQ4J6C6 727 aaPredicted RBP34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 ZNF354CQ86Y25 554 aa34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 RASGEF1CQ8N431 466 aa34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 ATP13A1Q9HD20 1204 aa34.08■■■■□ 3.05
CSNK1E-204ENST00000403904 PRRT4C9JH25 899 aa34.07■■■■□ 3.05
CSNK1E-204ENST00000403904 CES2O00748 559 aa34.07■■■■□ 3.05
CSNK1E-204ENST00000403904 APODP05090 189 aa34.07■■■■□ 3.05
CSNK1E-204ENST00000403904 GRIA2P42262 883 aa34.07■■■■□ 3.05
CSNK1E-204ENST00000403904 PLK1P53350 603 aa34.07■■■■□ 3.05
CSNK1E-204ENST00000403904 P3H4Q92791 437 aa34.07■■■■□ 3.05
CSNK1E-204ENST00000403904 BDP1A6H8Y1 2624 aa34.07■■■■□ 3.04
CSNK1E-204ENST00000403904 APOC4-APOC2K7ER74 178 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 APOC2P02655 101 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 GLDCP23378 1020 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 ETFBP38117 255 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 ZXDAP98168 799 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 PRKCQQ04759 706 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 SIX5Q8N196 739 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 ACE2Q9BYF1 805 aaPredicted RBP34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 SMARCAL1Q9NZC9 954 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 ARHGAP42A6NI28 874 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 MAN2B1O00754 1011 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 ZNF500O60304 480 aaPredicted RBP34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 SERINC3Q13530 473 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 DMC1Q14565 340 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 LONRF2Q1L5Z9 754 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 TMEM196Q5HYL7 178 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 MBLAC2Q68D91 279 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 ARHGAP36Q6ZRI8 547 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 WFIKKN2Q8TEU8 576 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 EXOC4Q96A65 974 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 FAM118BQ9BPY3 351 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 CIPCQ9C0C6 399 aa34.06■■■■□ 3.04
CSNK1E-204ENST00000403904 SNAP91O60641 907 aa34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 NR2C2P49116 596 aa34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 FSTL4Q6MZW2 842 aa34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 ZNF852Q6ZMS4 543 aa34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 SUGP1Q8IWZ8 645 aaKnown RBP34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 LRRN4Q8WUT4 740 aa34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 EZH1Q92800 747 aaPredicted RBP34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 CAPZA3Q96KX2 299 aa34.05■■■■□ 3.04
CSNK1E-204ENST00000403904 SHROOM3Q8TF72 1996 aa34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 CBX4O00257 560 aa34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 POLR2EP19388 210 aaKnown RBP34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 OTUD4Q01804 1114 aaKnown RBP34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 GALNT2Q10471 571 aa34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 DCAF4L2Q8NA75 395 aa34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 ACTL9Q8TC94 416 aa34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 SORCS1Q8WY21 1168 aa34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 C2orf49Q9BVC5 232 aaPredicted RBP34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 VPS51Q9UID3 782 aa34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 TTC7AQ9ULT0 858 aaPredicted RBP34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 R3HDM2Q9Y2K5 976 aaKnown RBP34.04■■■■□ 3.04
CSNK1E-204ENST00000403904 A0A0A0MRY4 1105 aa34.03■■■■□ 3.04
CSNK1E-204ENST00000403904 GRSF1Q12849 480 aaKnown RBP eCLIP34.03■■■■□ 3.04
CSNK1E-204ENST00000403904 NUDT18Q6ZVK8 323 aa34.03■■■■□ 3.04
CSNK1E-204ENST00000403904 ACTRT1Q8TDG2 376 aa34.03■■■■□ 3.04
CSNK1E-204ENST00000403904 OLFM3Q96PB7 478 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 462.9 ms