RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 SLC12A8A0AV02 714 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 K7EQS6 105 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 MYO1FO00160 1098 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 KRT86O43790 486 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 HMBSP08397 361 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 PSMA2P25787 234 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 CCR1P32246 355 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 SLC1A1P43005 524 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 SULT1E1P49888 294 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 TBX4P57082 545 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 SLC25A11Q02978 314 aaKnown RBP9.5□□□□□ -0.89
VPS53-203ENST00000401468 DEUP1Q05D60 604 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 KIF5AQ12840 1032 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 PDGFRLQ15198 375 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 DHCR24Q15392 516 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 C5orf22Q49AR2 442 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 RAB6CQ53S08 254 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 LY6G5CQ5SRR4 150 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 ARMCX6Q7L4S7 300 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 KIAA1328Q86T90 577 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 LONP2Q86WA8 852 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 PSTKQ8IV42 348 aaKnown RBP9.5□□□□□ -0.89
VPS53-203ENST00000401468 UNC45BQ8IWX7 931 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 BBS7Q8IWZ6 715 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 REXO1L1PQ8IX06 675 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 CPXM2Q8N436 756 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 DEFB119Q8N690 84 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 ADAM32Q8TC27 787 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 FAM172AQ8WUF8 416 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 RLN3Q8WXF3 142 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 C1orf74Q96LT6 269 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 HAPLN3Q96S86 360 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 DCLK3Q9C098 648 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 RAB6CQ9H0N0 254 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 ANLNQ9NQW6 1124 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 DDIT4Q9NX09 232 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 RASAL2Q9UJF2 1139 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 CDV3Q9UKY7 258 aaKnown RBP9.5□□□□□ -0.89
VPS53-203ENST00000401468 PYCARDQ9ULZ3 195 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 ZNF510Q9Y2H8 683 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 PAXBP1Q9Y5B6 917 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 FRYQ5TBA9 3013 aa9.5□□□□□ -0.89
VPS53-203ENST00000401468 ASPMQ8IZT6 3477 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 IGLV3-10A0A075B6K4 115 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 BUB1BO60566 1050 aaPredicted RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 RPP40O75818 363 aaKnown RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 KLF8O95600 359 aaPredicted RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 BCKDHBP21953 392 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ADRA1BP35368 520 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 DGKEP52429 567 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ATXN1P54253 815 aaKnown RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 NRLP54845 237 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ATP11AP98196 1134 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 CBLBQ13191 982 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 SEMA3BQ13214 749 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 DMC1Q14565 340 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ANO4Q32M45 955 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 FAM133BQ5BKY9 247 aaKnown RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 MANEALQ5VSG8 457 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 LRRC38Q5VT99 294 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ANO7Q6IWH7 933 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 RHBDF2Q6PJF5 856 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 TPGS1Q6ZTW0 290 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 POLNQ7Z5Q5 900 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 MIB1Q86YT6 1006 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ZNF683Q8IZ20 524 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ALLCQ8N6M5 410 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 KIAA1524Q8TCG1 905 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 TEKT4Q8WW24 435 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 P2RY11Q96G91 374 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 BTBD6Q96KE9 485 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 BTN2A3PQ96KV6 586 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 PEBP4Q96S96 227 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 PRMT1Q99873 361 aaKnown RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 NACA2Q9H009 215 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 OSBPL2Q9H1P3 480 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 WDCPQ9H6R7 721 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 FAM204AQ9H8W3 233 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 SEMA4GQ9NTN9 838 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 PLK2Q9NYY3 685 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 TBC1D14Q9P2M4 693 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 TRIM10Q9UDY6 481 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 AGO1Q9UL18 857 aaKnown RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 FZD10Q9ULW2 581 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 NEU3Q9UQ49 428 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 ALG6Q9Y672 507 aa9.49□□□□□ -0.89
VPS53-203ENST00000401468 MUC22E2RYF6 1773 aaPredicted RBP9.49□□□□□ -0.89
VPS53-203ENST00000401468 AKAP13Q12802 2813 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 MAST4O15021 2626 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 GRID2IPA4D2P6 1211 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 SGK1O00141 431 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 SLC9A3R1O14745 358 aaPredicted RBP9.48□□□□□ -0.89
VPS53-203ENST00000401468 ZSCAN12O43309 604 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 RNF8O76064 485 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 NFATC1O95644 943 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 APOEP02649 317 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 ADH5P11766 374 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 TCF4P15884 667 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 IL1R2P27930 398 aa9.48□□□□□ -0.89
VPS53-203ENST00000401468 MIPP30301 263 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms