RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SOX17Q9H6I2 414 aaPredicted RBP3.94□□□□□ -1.78
UBE3A-202ENST00000397954 SAMSN1Q9NSI8 373 aaKnown RBP3.94□□□□□ -1.78
UBE3A-202ENST00000397954 RAB20Q9NX57 234 aa3.94□□□□□ -1.78
UBE3A-202ENST00000397954 DDX43Q9NXZ2 648 aaKnown RBP3.94□□□□□ -1.78
UBE3A-202ENST00000397954 LSM7Q9UK45 103 aaKnown RBP3.94□□□□□ -1.78
UBE3A-202ENST00000397954 ITGB1BP2Q9UKP3 347 aa3.94□□□□□ -1.78
UBE3A-202ENST00000397954 AGAP1Q9UPQ3 857 aa3.94□□□□□ -1.78
UBE3A-202ENST00000397954 CEP83Q9Y592 693 aa3.94□□□□□ -1.78
UBE3A-202ENST00000397954 NPFFR2Q9Y5X5 522 aa3.94□□□□□ -1.78
UBE3A-202ENST00000397954 FHOD1Q9Y613 1164 aa3.94□□□□□ -1.78
UBE3A-202ENST00000397954 COL5A1P20908 1838 aaPredicted RBP3.94□□□□□ -1.78
UBE3A-202ENST00000397954 SRCAPQ6ZRS2 3230 aa3.94□□□□□ -1.78
UBE3A-202ENST00000397954 A0A1W2PQC6 194 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 CASTOR2A6NHX0 329 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 RHPN2P1A8MT19 583 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TOR1BO14657 336 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 FANCGO15287 622 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TMPRSS2O15393 492 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 LILRB5O75023 590 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 INMTO95050 263 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ITGB3P05106 788 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 POLBP06746 335 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 RHOP08100 348 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 WEE2P0C1S8 567 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 FAM200BP0CF97 657 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PTPN1P18031 435 aaKnown RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TNNI1P19237 187 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 FGFR4P22455 802 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 HOXD13P35453 343 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 GNL1P36915 607 aaPredicted RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 LIMK1P53667 647 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 SOX4Q06945 474 aaPredicted RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 BST2Q10589 180 aaKnown RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 CNGA2Q16280 664 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 RETSATQ6NUM9 610 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 LCLAT1Q6UWP7 414 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 GBP6Q6ZN66 633 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 VSIG1Q86XK7 387 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PSTKQ8IV42 348 aaKnown RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 NPAS3Q8IXF0 933 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TXLNBQ8N3L3 684 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 OSCP1Q8WVF1 389 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 GOLGA1Q92805 767 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PGAP3Q96FM1 320 aaPredicted RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 VCPIP1Q96JH7 1222 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PKNOX2Q96KN3 472 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 KREMEN1Q96MU8 473 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 DUSP16Q9BY84 665 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 NUP62CLQ9H1M0 184 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 POMKQ9H5K3 350 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PDP2Q9P2J9 529 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TUBGCP4Q9UGJ1 667 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 EBF1Q9UH73 591 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 SIX4Q9UIU6 781 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PRG3Q9Y2Y8 225 aaPredicted RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 STARD13Q9Y3M8 1113 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 BZW2Q9Y6E2 419 aaKnown RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 A0A1W2PQJ5 194 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 KANSL1LA0AUZ9 987 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 SLC38A8A6NNN8 435 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PRR5-ARHGAP8B1AHC4 643 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 C2CD4DB7Z1M9 353 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TM4SF5O14894 197 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ZNF263O14978 683 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ALOX15BO15296 676 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TIPRLO75663 272 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 OAS1P00973 400 aaKnown RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 EPCAMP16422 314 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 HTR1BP28222 390 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ADH7P40394 386 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 FMO5P49326 533 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 GATMP50440 423 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 SUOXP51687 545 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 COG7P83436 770 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ARHGAP8P85298 464 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ZBTB16Q05516 673 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 PDE1CQ14123 709 aaPredicted RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ACAP1Q15027 740 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ZNF77Q15935 545 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 CLEC16AQ2KHT3 1053 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 INTS11Q5TA45 600 aaKnown RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 KLHDC7AQ5VTJ3 777 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 CPZQ66K79 652 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 MBLAC2Q68D91 279 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ESRP1Q6NXG1 681 aaKnown RBP3.93□□□□□ -1.78
UBE3A-202ENST00000397954 DENND5BQ6ZUT9 1274 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 HTR3DQ70Z44 454 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 TRIM46Q7Z4K8 759 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 KRT77Q7Z794 578 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 UNC45BQ8IWX7 931 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 VWA5B2Q8N398 1253 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ANKRD52Q8NB46 1076 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 BPIFB1Q8TDL5 484 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 LRRC15Q8TF66 581 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 KBTBD7Q8WVZ9 684 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 ASB12Q8WXK4 309 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 C18orf8Q96DM3 657 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 CCDC140Q96MF4 163 aa3.93□□□□□ -1.78
UBE3A-202ENST00000397954 MED15Q96RN5 788 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms